RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 MAP3K20Q9NYL2 800 aaKnown RBP25.67■■□□□ 1.7
PABPN1-202ENST00000397276 FTLP02792 175 aaPredicted RBP25.66■■□□□ 1.7
PABPN1-202ENST00000397276 ZNF211Q13398 564 aaPredicted RBP25.66■■□□□ 1.7
PABPN1-202ENST00000397276 SNRNP35Q16560 246 aaKnown RBP25.66■■□□□ 1.7
PABPN1-202ENST00000397276 SWSAP1Q6NVH7 229 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 ZNF280CQ8ND82 737 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 MOV10L1Q9BXT6 1211 aaKnown RBP25.66■■□□□ 1.7
PABPN1-202ENST00000397276 PICK1Q9NRD5 415 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 TOPORSQ9NS56 1045 aaPredicted RBP25.66■■□□□ 1.7
PABPN1-202ENST00000397276 PCDHA10Q9Y5I2 948 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 ZNF862O60290 1169 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 SGPL1O95470 568 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 SMTNP53814 917 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 NCKAP1LP55160 1127 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 VSIG10LQ86VR7 867 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 TMEM161BQ8NDZ6 487 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 KMT5AQ9NQR1 393 aa25.66■■□□□ 1.7
PABPN1-202ENST00000397276 TMEM110-MUSTN1A8MSY1 372 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 FGGP02679 453 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 HNRNPH1P31943 449 aaKnown RBP25.65■■□□□ 1.7
PABPN1-202ENST00000397276 SFNP31947 248 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 COPB2P35606 906 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 DMP1Q13316 513 aaPredicted RBP25.65■■□□□ 1.7
PABPN1-202ENST00000397276 USP20Q9Y2K6 914 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 NR2E1Q9Y466 385 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 ZEB2O60315 1214 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 PTPRAP18433 802 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 CCND2P30279 289 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 CFAP58Q5T655 872 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 SCYL3Q8IZE3 742 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 SEMA4DQ92854 862 aa25.65■■□□□ 1.7
PABPN1-202ENST00000397276 CELF4Q9BZC1 486 aaKnown RBP25.65■■□□□ 1.7
PABPN1-202ENST00000397276 ANKRD62A6NC57 917 aa25.64■■□□□ 1.7
PABPN1-202ENST00000397276 PPATQ06203 517 aa25.64■■□□□ 1.7
PABPN1-202ENST00000397276 ANGEL2Q5VTE6 544 aaKnown RBP25.64■■□□□ 1.7
PABPN1-202ENST00000397276 CTTNBP2NLQ9P2B4 639 aa25.64■■□□□ 1.7
PABPN1-202ENST00000397276 FER1L6Q2WGJ9 1857 aa25.64■■□□□ 1.7
PABPN1-202ENST00000397276 CYP26A1O43174 497 aa25.64■■□□□ 1.69
PABPN1-202ENST00000397276 C12orf56Q8IXR9 622 aa25.64■■□□□ 1.69
PABPN1-202ENST00000397276 GPATCH11Q8N954 259 aa25.64■■□□□ 1.69
PABPN1-202ENST00000397276 TMOD4Q9NZQ9 345 aa25.64■■□□□ 1.69
PABPN1-202ENST00000397276 GOLGA8KD6RF30 607 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 ATMINO43313 823 aaPredicted RBP25.63■■□□□ 1.69
PABPN1-202ENST00000397276 RGS20O76081 388 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 DCAF12L1Q5VU92 463 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 ALS2CLQ60I27 953 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 SUGP1Q8IWZ8 645 aaKnown RBP25.63■■□□□ 1.69
PABPN1-202ENST00000397276 TAF1DQ9H5J8 278 aaPredicted RBP25.63■■□□□ 1.69
PABPN1-202ENST00000397276 ANKEF1Q9NU02 776 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 NCANO14594 1321 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 OPA1O60313 960 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 DLATP10515 647 aaKnown RBP25.63■■□□□ 1.69
PABPN1-202ENST00000397276 TMEM132BQ14DG7 1078 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 SLC47A2Q86VL8 602 aa25.63■■□□□ 1.69
PABPN1-202ENST00000397276 NDUFAB1O14561 156 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 RPS12P25398 132 aaKnown RBP25.62■■□□□ 1.69
PABPN1-202ENST00000397276 AADACL2Q6P093 401 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 POMGNT1Q8WZA1 660 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 KREMEN1Q96MU8 473 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 PCDHB18PQ96TA0 734 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 YY1AP1Q9H869 796 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 TTI1O43156 1089 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 PEX10O60683 326 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 RASGEF1CQ8N431 466 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 IWS1Q96ST2 819 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 TRIM31Q9BZY9 425 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 ST6GALNAC4Q9H4F1 302 aa25.62■■□□□ 1.69
PABPN1-202ENST00000397276 SEPT9Q9UHD8 586 aaPredicted RBP25.62■■□□□ 1.69
PABPN1-202ENST00000397276 MYO1FO00160 1098 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 DDX3YO15523 660 aaKnown RBP25.61■■□□□ 1.69
PABPN1-202ENST00000397276 RFX1P22670 979 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 DCAF15Q66K64 600 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 NOP9Q86U38 636 aaKnown RBP25.61■■□□□ 1.69
PABPN1-202ENST00000397276 ZNF214Q9UL59 606 aaPredicted RBP25.61■■□□□ 1.69
PABPN1-202ENST00000397276 PFASO15067 1338 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 GUCY1A3Q02108 690 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 NNTQ13423 1086 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 FMNL3Q8IVF7 1028 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 ISCUQ9H1K1 167 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 NEUROG2Q9H2A3 272 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 EXOC7Q9UPT5 735 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 ADGRA3Q8IWK6 1321 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 CALCAP01258 141 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 SLC39A4Q6P5W5 647 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 OTUD6AQ7L8S5 288 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 MAP4K3Q8IVH8 894 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 IQCKQ8N0W5 287 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 NSUN6Q8TEA1 469 aaKnown RBP25.61■■□□□ 1.69
PABPN1-202ENST00000397276 PARD3BQ8TEW8 1205 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 PIK3R5Q8WYR1 880 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 CALR3Q96L12 384 aaKnown RBP25.61■■□□□ 1.69
PABPN1-202ENST00000397276 FAM107BQ9H098 131 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 AS3MTQ9HBK9 375 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 ALG6Q9Y672 507 aa25.61■■□□□ 1.69
PABPN1-202ENST00000397276 ZNF233A6NK53 670 aa25.6■■□□□ 1.69
PABPN1-202ENST00000397276 P4HA2O15460 535 aa25.6■■□□□ 1.69
PABPN1-202ENST00000397276 DAPK3O43293 454 aa25.6■■□□□ 1.69
PABPN1-202ENST00000397276 KCNA2P16389 499 aa25.6■■□□□ 1.69
PABPN1-202ENST00000397276 MNAT1P51948 309 aa25.6■■□□□ 1.69
PABPN1-202ENST00000397276 CCDC60Q8IWA6 550 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms