RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ATP6V0A1Q93050 837 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 FAM129AQ9BZQ8 928 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 TRIM9Q9C026 710 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 E7ENQ6 273 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 LPXNO60711 386 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 SCTRP47872 440 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 TFDP2Q14188 446 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 TRABDQ9H4I3 376 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 NDUFA13Q9P0J0 144 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 A0A0G2JLW4 131 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 ITIH2P19823 946 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 VHLP40337 213 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 DRAP1Q14919 205 aaPredicted RBP20.93■□□□□ 0.94
SHANK1-203ENST00000391813 SPOPLQ6IQ16 392 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 BTBD6Q96KE9 485 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 FAM84BQ96KN1 310 aaPredicted RBP20.93■□□□□ 0.94
SHANK1-203ENST00000391813 RANBP17Q9H2T7 1088 aaKnown RBP20.93■□□□□ 0.94
SHANK1-203ENST00000391813 ADAM22Q9P0K1 906 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 FAM47DPA6NHR8 397 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 CAPN9O14815 690 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 FGFR4P22455 802 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 CTCFP49711 727 aaPredicted RBP20.93■□□□□ 0.94
SHANK1-203ENST00000391813 AP1B1Q10567 949 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 FRMD5Q7Z6J6 570 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 EXOC8Q8IYI6 725 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 KMT5AQ9NQR1 393 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 KCND1Q9NSA2 647 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 HERC5Q9UII4 1024 aaKnown RBP20.93■□□□□ 0.94
SHANK1-203ENST00000391813 GGT7Q9UJ14 662 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 PNMA6FA0A0J9YX94 578 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 USP17L5A8MUK1 530 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 FTLP02792 175 aaPredicted RBP20.92■□□□□ 0.94
SHANK1-203ENST00000391813 KPNB1Q14974 876 aaKnown RBP20.92■□□□□ 0.94
SHANK1-203ENST00000391813 EZH2Q15910 746 aaKnown RBP20.92■□□□□ 0.94
SHANK1-203ENST00000391813 ENAHQ8N8S7 591 aaPredicted RBP20.92■□□□□ 0.94
SHANK1-203ENST00000391813 DCAF4Q8WV16 495 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 KDM4CQ9H3R0 1056 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 NUB1Q9Y5A7 615 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 hCG_2014768A0A024R1R8 64 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 PHF2O75151 1096 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 USP17L2Q6R6M4 530 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 DNAAF3Q8N9W5 541 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 HOXC10Q9NYD6 342 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 ANP32DO95626 131 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 FDX1P10109 184 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 POLD4Q9HCU8 107 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 LRRIQ4A6NIV6 560 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 IZUMO3Q5VZ72 239 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 RCSD1Q6JBY9 416 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 BZW1Q7L1Q6 419 aaKnown RBP20.92■□□□□ 0.94
SHANK1-203ENST00000391813 PACS2Q86VP3 889 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 NUDCD3Q8IVD9 361 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 PROCA1Q8NCQ7 364 aaPredicted RBP20.92■□□□□ 0.94
SHANK1-203ENST00000391813 OR2W6PQ8NHA6 318 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 ATL2Q8NHH9 583 aa20.92■□□□□ 0.94
SHANK1-203ENST00000391813 PDS5AQ29RF7 1337 aaKnown RBP20.91■□□□□ 0.94
SHANK1-203ENST00000391813 KCNB2Q92953 911 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 WARS2Q9UGM6 360 aaKnown RBP20.91■□□□□ 0.94
SHANK1-203ENST00000391813 G3BP2Q9UN86 482 aaKnown RBP20.91■□□□□ 0.94
SHANK1-203ENST00000391813 GH2P01242 217 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 RSPH3Q86UC2 560 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 GLYCTKQ8IVS8 523 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 SH3RF3Q8TEJ3 882 aaPredicted RBP20.91■□□□□ 0.94
SHANK1-203ENST00000391813 ADPGKQ9BRR6 497 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 HEMGNQ9BXL5 484 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 WDR64B1ANS9 1081 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 NQO1P15559 274 aaKnown RBP20.91■□□□□ 0.94
SHANK1-203ENST00000391813 ZFXP17010 805 aaPredicted RBP20.91■□□□□ 0.94
SHANK1-203ENST00000391813 NAB2Q15742 525 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 MTFR1LQ9H019 292 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 ANKZF1Q9H8Y5 726 aa20.91■□□□□ 0.94
SHANK1-203ENST00000391813 MAGEA13PA6NCF6 341 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 PRPSAP2O60256 369 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 SOX5P35711 763 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 ARL4AP40617 200 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 POLGP54098 1239 aaPredicted RBP20.9■□□□□ 0.94
SHANK1-203ENST00000391813 NOP14P78316 857 aaKnown RBP20.9■□□□□ 0.94
SHANK1-203ENST00000391813 AP3B2Q13367 1082 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 DYNLL2Q96FJ2 89 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 ERGIC2Q96RQ1 377 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 WRNIP1Q96S55 665 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 NUP85Q9BW27 656 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 NTSR2O95665 410 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 CSF1RP07333 972 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 HSD17B3P37058 310 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 GABPAQ06546 454 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 KCTD1Q719H9 257 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 SFR1Q86XK3 245 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 COL23A1Q86Y22 540 aaPredicted RBP20.9■□□□□ 0.94
SHANK1-203ENST00000391813 DTX3LQ8TDB6 740 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 ANKS1AQ92625 1134 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 FAF2Q96CS3 445 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 ERP44Q9BS26 406 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 TMEM120BA0PK00 339 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 KRT17Q04695 432 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 RIBC1Q8N443 379 aaPredicted RBP20.9■□□□□ 0.94
SHANK1-203ENST00000391813 TRPV6Q9H1D0 765 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 SEL1LQ9UBV2 794 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 RHOT1Q8IXI2 618 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 DACT3Q96B18 629 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms