RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ULK2Q8IYT8 1036 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 RTKN2Q8IZC4 609 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 D2HGDHQ8N465 521 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 CHST14Q8NCH0 376 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 OR14K1Q8NGZ2 314 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 ZG16BQ96DA0 208 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 OR10A5Q9H207 317 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 PARPBPQ9NWS1 579 aa6.15□□□□□ -1.42
PMS1-202ENST00000374826 PIK3R4Q99570 1358 aa6.15□□□□□ -1.43
PMS1-202ENST00000374826 PRAG1Q86YV5 1406 aa6.15□□□□□ -1.43
PMS1-202ENST00000374826 CDC42BPGQ6DT37 1551 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 NHSL1Q5SYE7 1610 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 GOLGA6L22H0YM25 854 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 SLC26A4O43511 780 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 RFPL3O75679 317 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 SDSP20132 328 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.43
PMS1-202ENST00000374826 MOGSQ13724 837 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 PIK3R6Q5UE93 754 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 SYNPOQ8N3V7 929 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 SHCBP1Q8NEM2 672 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 CALML6Q8TD86 181 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 ERCC4Q92889 916 aaPredicted RBP6.14□□□□□ -1.43
PMS1-202ENST00000374826 CLIP3Q96DZ5 547 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 TMEM176AQ96HP8 235 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 RNPC3Q96LT9 517 aaKnown RBP6.14□□□□□ -1.43
PMS1-202ENST00000374826 AGAP2Q99490 1192 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 CABP5Q9NP86 173 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 SLC2A4RGQ9NR83 387 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 TBX22Q9Y458 520 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 DMRT1Q9Y5R6 373 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 TMEM94Q12767 1356 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 TONSLQ96HA7 1378 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 PTCH1Q13635 1447 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 YTHDC2Q9H6S0 1430 aaKnown RBP6.14□□□□□ -1.43
PMS1-202ENST00000374826 DLC1Q96QB1 1528 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 ADGRB2O60241 1585 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 USP32Q8NFA0 1604 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 TOPAZ1Q8N9V7 1692 aa6.14□□□□□ -1.43
PMS1-202ENST00000374826 CAPN14A8MX76 684 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 CYP27B1O15528 508 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 JMJD7P0C870 316 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 FLT3P36888 993 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 KIF11P52732 1056 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 RRP1BQ14684 758 aaKnown RBP6.13□□□□□ -1.43
PMS1-202ENST00000374826 TCEA2Q15560 299 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 GRAMD4Q6IC98 578 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 PCSK4Q6UW60 755 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 PRRX2Q99811 253 aa6.13□□□□□ -1.43
PMS1-202ENST00000374826 REXO2Q9Y3B8 237 aaKnown RBP6.13□□□□□ -1.43
PMS1-202ENST00000374826 PTPDC1A2A3K4 754 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 TRAF5O00463 557 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 DVL2O14641 736 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 TECPR2O15040 1411 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 PPFIA2O75334 1257 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 PEX11BO96011 259 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 LRPPRCP42704 1394 aaKnown RBP6.12□□□□□ -1.43
PMS1-202ENST00000374826 FNTBP49356 437 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 ALDH6A1Q02252 535 aaKnown RBP6.12□□□□□ -1.43
PMS1-202ENST00000374826 KIF1AQ12756 1690 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 UBE2R2Q712K3 238 aaPredicted RBP6.12□□□□□ -1.43
PMS1-202ENST00000374826 RTN4RL1Q86UN2 441 aaPredicted RBP6.12□□□□□ -1.43
PMS1-202ENST00000374826 HOMER1Q86YM7 354 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 FOXRED1Q96CU9 486 aaPredicted RBP6.12□□□□□ -1.43
PMS1-202ENST00000374826 ADGRL3Q9HAR2 1447 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 MAGEC2Q9UBF1 373 aaPredicted RBP6.12□□□□□ -1.43
PMS1-202ENST00000374826 FAM184BQ9ULE4 1060 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 CD2APQ9Y5K6 639 aa6.12□□□□□ -1.43
PMS1-202ENST00000374826 AKAP12Q02952 1782 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 MARF1Q9Y4F3 1742 aaKnown RBP6.11□□□□□ -1.43
PMS1-202ENST00000374826 RALGAPBQ86X10 1494 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 MSH6P52701 1360 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 PLEKHH1Q9ULM0 1364 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 H7C1D1 291 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 KRT4P19013 534 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 APEX1P27695 318 aaKnown RBP6.11□□□□□ -1.43
PMS1-202ENST00000374826 STAT5BP51692 787 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
PMS1-202ENST00000374826 Q6ZPA2 131 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 APPBP2Q92624 585 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 CRAMP1Q96RY5 1269 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 FOXB1Q99853 325 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 PCIF1Q9H4Z3 704 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 INTS7Q9NVH2 962 aaKnown RBP6.11□□□□□ -1.43
PMS1-202ENST00000374826 STK26Q9P289 416 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 B4GALT6Q9UBX8 382 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 ABCA3Q99758 1704 aa6.11□□□□□ -1.43
PMS1-202ENST00000374826 COL16A1Q07092 1604 aaPredicted RBP6.1□□□□□ -1.43
PMS1-202ENST00000374826 CBX4O00257 560 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 RAMP2O60895 175 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 RIN1Q13671 783 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 ZNF174Q15697 407 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 CFAP100Q494V2 611 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 RABGGTAQ92696 567 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 E2F7Q96AV8 911 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 C14orf93Q9H972 538 aaKnown RBP6.1□□□□□ -1.43
PMS1-202ENST00000374826 ACSS2Q9NR19 701 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 FANCLQ9NW38 375 aa6.1□□□□□ -1.43
PMS1-202ENST00000374826 SH3BP1Q9Y3L3 701 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms