RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 K7ERI5 159 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 PBX3P40426 434 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 ALDH7A1P49419 539 aaKnown RBP22.08■■□□□ 1.12
TMEM53-205ENST00000372244 BCAR1P56945 870 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 DMP1Q13316 513 aaPredicted RBP22.08■■□□□ 1.12
TMEM53-205ENST00000372244 SLC39A11Q8N1S5 342 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 KRI1Q8N9T8 703 aaKnown RBP22.08■■□□□ 1.12
TMEM53-205ENST00000372244 RAD54LQ92698 747 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 ZNF396Q96N95 335 aaPredicted RBP22.08■■□□□ 1.12
TMEM53-205ENST00000372244 PDZD7Q9H5P4 517 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 NRDE2Q9H7Z3 1164 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 SPG21Q9NZD8 308 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 TFIP11Q9UBB9 837 aaKnown RBP22.08■■□□□ 1.12
TMEM53-205ENST00000372244 INPP5FQ9Y2H2 1132 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 USP20Q9Y2K6 914 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 GIT1Q9Y2X7 761 aa22.08■■□□□ 1.12
TMEM53-205ENST00000372244 PLS3P13797 630 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 IRS1P35568 1242 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 PPM1AP35813 382 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 TFF2Q03403 129 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 RAD51AP2Q09MP3 1159 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 PKP1Q13835 747 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 NT5DC1Q5TFE4 455 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 ZNF280BQ86YH2 543 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 MRPS27Q92552 414 aaKnown RBP22.07■■□□□ 1.12
TMEM53-205ENST00000372244 SYMPKQ92797 1274 aaKnown RBP22.07■■□□□ 1.12
TMEM53-205ENST00000372244 TRIM6Q9C030 488 aaPredicted RBP22.07■■□□□ 1.12
TMEM53-205ENST00000372244 NXF3Q9H4D5 531 aaKnown RBP22.07■■□□□ 1.12
TMEM53-205ENST00000372244 KIAA1671Q9BY89 1806 aa22.07■■□□□ 1.12
TMEM53-205ENST00000372244 NPHP3-ACAD11A0A0J9YXS1 232 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 CARNS1A5YM72 827 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 ARL5CA6NH57 179 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 N4BP3O15049 544 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 NCK2O43639 380 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 NPTXRO95502 500 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 F13A1P00488 732 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 GALTP07902 379 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 MCM6Q14566 821 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 TAS1R3Q7RTX0 852 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 GSTCDQ8NEC7 633 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 URGCPQ8TCY9 931 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 KMT5AQ9NQR1 393 aa22.06■■□□□ 1.12
TMEM53-205ENST00000372244 PUF60Q9UHX1 559 aaKnown RBP22.06■■□□□ 1.12
TMEM53-205ENST00000372244 FSCN2O14926 492 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 B4GALT3O60512 393 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 DDHD2O94830 711 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 ERVFC1P60507 584 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 KRT17Q04695 432 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 RNASELQ05823 741 aaKnown RBP22.05■■□□□ 1.12
TMEM53-205ENST00000372244 CTC1Q2NKJ3 1217 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 FOXD4L5Q5VV16 416 aaPredicted RBP22.05■■□□□ 1.12
TMEM53-205ENST00000372244 PDE12Q6L8Q7 609 aaKnown RBP22.05■■□□□ 1.12
TMEM53-205ENST00000372244 FOXD4L4Q8WXT5 416 aaPredicted RBP22.05■■□□□ 1.12
TMEM53-205ENST00000372244 KCNN1Q92952 543 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 GAD1Q99259 594 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 TLR9Q9NR96 1032 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 MIOSQ9NXC5 875 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 ODF2LQ9ULJ1 636 aa22.05■■□□□ 1.12
TMEM53-205ENST00000372244 SPTLC2O15270 562 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 ZC3H11AO75152 810 aaKnown RBP eCLIP22.04■■□□□ 1.12
TMEM53-205ENST00000372244 PPP6R2O75170 966 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 LIG1P18858 919 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 HYAL1Q12794 435 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 STK38Q15208 465 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 AAK1Q2M2I8 961 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 TJAP1Q5JTD0 557 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 PHLPP2Q6ZVD8 1323 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 GPBP1Q86WP2 473 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 HACE1Q8IYU2 909 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 TMEM161BQ8NDZ6 487 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 RASSF8Q8NHQ8 419 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 LARP4BQ92615 738 aaKnown RBP22.04■■□□□ 1.12
TMEM53-205ENST00000372244 PTPRHQ9HD43 1115 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 DNAJB4Q9UDY4 337 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 CCDC39Q9UFE4 941 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 TNFSF13BQ9Y275 285 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 NCOR1O75376 2440 aa22.04■■□□□ 1.12
TMEM53-205ENST00000372244 NT5C1B-RDH14C9J2C7 533 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 SLC16A4O15374 487 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 YEATS4O95619 227 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 POMCP01189 267 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 BMP1P13497 986 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 AKAP5P24588 427 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ZNF131P52739 623 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 SMTNP53814 917 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 GIT2Q14161 759 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ATF7IP2Q5U623 682 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 EEF1DP3Q658K8 133 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ATL3Q6DD88 541 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 PABPC5Q96DU9 382 aaKnown RBP22.03■■□□□ 1.12
TMEM53-205ENST00000372244 IGSF21Q96ID5 467 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ZFP42Q96MM3 310 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ACO2Q99798 780 aaKnown RBP22.03■■□□□ 1.12
TMEM53-205ENST00000372244 REEP2Q9BRK0 252 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 UBE2ZQ9H832 354 aaPredicted RBP22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ZMYM2Q9UBW7 1377 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 ALDH2P05091 517 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 MLH1P40692 756 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 DSC1Q08554 894 aa22.03■■□□□ 1.12
TMEM53-205ENST00000372244 DHX8Q14562 1220 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms