RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SUGCTQ9HAC7 445 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
USF1-203ENST00000368021 SIK3Q9Y2K2 1263 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 EVPLQ92817 2033 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 K7ERI5 159 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 HNRNPDLO14979 420 aaKnown RBP13.16□□□□□ -0.3
USF1-203ENST00000368021 MFAP3LO75121 409 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 SKILP12757 684 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 GARTP22102 1010 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 ADSSP30520 456 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 CASP14P31944 242 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
USF1-203ENST00000368021 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 KCNH2Q12809 1159 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 EFCAB12Q6NXP0 572 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 LRRC71Q8N4P6 559 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 TRAPPC12Q8WVT3 735 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 CBWD1Q9BRT8 395 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 HSPBP1Q9NZL4 362 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
USF1-203ENST00000368021 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 GTPBP10A4D1E9 387 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 RRN3P2A6NIE6 340 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 KCNJ6P48051 423 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 ADKP55263 362 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 GJA9P57773 515 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 TFDP1Q14186 410 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 FSCN1Q16658 493 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.3
USF1-203ENST00000368021 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 FBXL18Q96ME1 805 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 NFKBIZQ9BYH8 718 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 CAPN11Q9UMQ6 739 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 STYXL1Q9Y6J8 313 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 CEP290O15078 2479 aa13.15□□□□□ -0.3
USF1-203ENST00000368021 TISP43B9A030 160 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 STX10O60499 249 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 ASGR1P07306 291 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 KLRC1P26715 233 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 TMOD1P28289 359 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
USF1-203ENST00000368021 NKX3-2P78367 333 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 BFSP1Q12934 665 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 GRIK4Q16099 956 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 METTL13Q8N6R0 699 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 KAT2BQ92831 832 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 SECISBP2LQ93073 1101 aaKnown RBP13.14□□□□□ -0.31
USF1-203ENST00000368021 BICD1Q96G01 975 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
USF1-203ENST00000368021 PYCARDQ9ULZ3 195 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
USF1-203ENST00000368021 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 TTC26A0AVF1 554 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 HAS3O00219 553 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 KPNA6O60684 536 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 COL6A1P12109 1028 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 FECHP22830 423 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 LIG4P49917 911 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 CLCN3P51790 818 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 ACLYP53396 1101 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 IGBP1P78318 339 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 ENPEPQ07075 957 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 DCAF17Q5H9S7 520 aaPredicted RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 MTHFD1LQ6UB35 978 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 ZPBP2Q6X784 338 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 KLHDC9Q8NEP7 349 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 POMGNT1Q8WZA1 660 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 KATNAL1Q9BW62 490 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 EDEM3Q9BZQ6 932 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 LUC7L2Q9Y383 392 aaKnown RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 A0A1W2PQ45 241 aaPredicted RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 A0A1W2PQY0 241 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 ARHGAP6O43182 974 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 KRT13P13646 458 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 PTENP60484 403 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 KIAA0753Q2KHM9 967 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms