RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TAC1P20366 129 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 CAP2P40123 477 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 C2orf54Q08AI8 447 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 R3HDM1Q15032 1099 aaKnown RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 CYFIP1Q7L576 1253 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 SCG3Q8WXD2 468 aaKnown RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 CHAMP1Q96JM3 812 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 GDAP1L1Q96MZ0 367 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 SLITRK6Q9H5Y7 841 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 EPB41L4AQ9HCS5 686 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 MAD2L2Q9UI95 211 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 FARP1Q9Y4F1 1045 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 A0A1W2PQJ5 194 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 KRT38O76015 456 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 SRGNP10124 158 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 DPEP1P16444 411 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 SLC26A2P50443 739 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 PSMC1P62191 440 aaKnown RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 LAMB3Q13751 1172 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 DHX34Q14147 1143 aaKnown RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 PTPROQ16827 1216 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 MED15Q96RN5 788 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 NUP85Q9BW27 656 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 FSD1LQ9BXM9 530 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 UBN1Q9NPG3 1134 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 KLHL8Q9P2G9 620 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 PPP1R12AO14974 1030 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 FGFR2P21802 821 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 RWDD4Q6NW29 188 aaKnown RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 TRAPPC11Q7Z392 1133 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 CDKL3Q8IVW4 592 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 GBP7Q8N8V2 638 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 RNF149Q8NC42 400 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 MICAL1Q8TDZ2 1067 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 FAF2Q96CS3 445 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 UVRAGQ9P2Y5 699 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 KIF28PB7ZC32 967 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 H3BRJ5 948 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 TTC4O95801 387 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 APOEP02649 317 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 RARBP10826 455 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 SAT1P21673 171 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 CXCR5P32302 372 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 SLC8A1P32418 973 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 GUCY1A2P33402 732 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 TAF1BQ53T94 588 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-202ENST00000360093 ERO1BQ86YB8 467 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 NUDT12Q9BQG2 462 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 APEX2Q9UBZ4 518 aa5.18□□□□□ -1.58
SCN3A-202ENST00000360093 A8MXQ7 604 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FTLP02792 175 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ACADSBP45954 432 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 RBBP5Q15291 538 aaKnown RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CCDC38Q502W7 563 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FKBP1CQ5VVH2 108 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SYN2Q92777 582 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 KIF2CQ99661 725 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ZWILCHQ9H900 591 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PDE11AQ9HCR9 933 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 HSPBP1Q9NZL4 362 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FAM205AQ6ZU69 1335 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PNPLA4P41247 253 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CYP27A1Q02318 531 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CDO1Q16878 200 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CD302Q8IX05 232 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ADSSL1Q8N142 457 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ATP6V1E2Q96A05 226 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 AGPAT1Q99943 283 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FAM217BQ9NTX9 383 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CCL15-CCL14A0A0B4J2E2 113 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 A0A1B0GTH6 734 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 M0QYV0 167 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 KPNA6O60684 536 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CCT5P48643 541 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PIGHQ14442 188 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CCL15Q16663 113 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ANKRD40Q6AI12 368 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PLEKHA4Q9H4M7 779 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PCDHB8Q9UN66 801 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PRR29P0C7W0 189 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ATP1A2P50993 1020 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 BACE1P56817 501 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CDK17Q00537 523 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TROAPQ12815 778 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SNX17Q15036 470 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 HEATR6Q6AI08 1181 aaKnown RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CAPN12Q6ZSI9 719 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 IFT43Q96FT9 208 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 LRGUKQ96M69 825 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 OSBPL9Q96SU4 736 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PPP1R16BQ96T49 567 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TMEM8AQ9HCN3 771 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ARHGAP42A6NI28 874 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 EXTL3O43909 919 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SLC18A3Q16572 532 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 DCAF4L1Q3SXM0 396 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SV2CQ496J9 727 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 METTL16Q86W50 562 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms