RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PCBP1Q15365 356 aaKnown RBP eCLIP21.59■■□□□ 1.05
ITGA4-202ENST00000339307 ATAT1Q5SQI0 421 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 C8orf76Q96K31 380 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 MTMR9Q96QG7 549 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 GAD1Q99259 594 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 TMEM175Q9BSA9 504 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 TMEM60Q9H2L4 133 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 RNF39Q9H2S5 420 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 DBR1Q9UK59 544 aaKnown RBP21.59■■□□□ 1.05
ITGA4-202ENST00000339307 LIMCH1Q9UPQ0 1083 aa21.59■■□□□ 1.05
ITGA4-202ENST00000339307 LRRIQ4A6NIV6 560 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 MBTD1Q05BQ5 628 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 SIGLEC14Q08ET2 396 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 PTPN14Q15678 1187 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 ZNF174Q15697 407 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 PTPN21Q16825 1174 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 TMC5Q6UXY8 1006 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 ALYREFQ86V81 257 aaKnown RBP21.58■■□□□ 1.05
ITGA4-202ENST00000339307 PPFIBP1Q86W92 1011 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 CDR2LQ86X02 465 aaPredicted RBP21.58■■□□□ 1.05
ITGA4-202ENST00000339307 HACE1Q8IYU2 909 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 VN1R3Q9BXE9 311 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 CSRNP2Q9H175 543 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 MRPL17Q9NRX2 175 aaKnown RBP21.58■■□□□ 1.05
ITGA4-202ENST00000339307 STK39Q9UEW8 545 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 IRAK3Q9Y616 596 aa21.58■■□□□ 1.05
ITGA4-202ENST00000339307 ARL5CA6NH57 179 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 NR1I2O75469 434 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 GLRA2P23416 452 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 ARL2P36404 184 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 ST3GAL1Q11201 340 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 TMEM132AQ24JP5 1023 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 CCDC51Q96ER9 411 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 KLHL5Q96PQ7 755 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 GPRC5CQ9NQ84 441 aa21.57■■□□□ 1.04
ITGA4-202ENST00000339307 C2CD4DB7Z1M9 353 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 B4GALT5O43286 388 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 NPTXRO95502 500 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 URODP06132 367 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 ARF4P18085 180 aaPredicted RBP21.56■■□□□ 1.04
ITGA4-202ENST00000339307 SCNN1GP51170 649 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 CATSPER3Q86XQ3 398 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 FAM184AQ8NB25 1140 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 SLC22A17Q8WUG5 538 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 ZFP42Q96MM3 310 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 NXF3Q9H4D5 531 aaKnown RBP21.56■■□□□ 1.04
ITGA4-202ENST00000339307 PARP2Q9UGN5 583 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 TECTAO75443 2155 aa21.56■■□□□ 1.04
ITGA4-202ENST00000339307 CNPP09543 421 aaKnown RBP21.55■■□□□ 1.04
ITGA4-202ENST00000339307 XRCC6P12956 609 aaKnown RBP eCLIP21.55■■□□□ 1.04
ITGA4-202ENST00000339307 LIG1P18858 919 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 AKAP5P24588 427 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 POU5F1BQ06416 359 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 BMP8AQ7Z5Y6 402 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 KREMEN2Q8NCW0 462 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 ERMNQ8TAM6 284 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 KCNH6Q9H252 994 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 TUFT1Q9NNX1 390 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 MED24O75448 989 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 SPATA31C1P0DKV0 1188 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 MYBP10242 640 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 NHLH1Q02575 133 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 KIAA1841Q6NSI8 718 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 IFNLR1Q8IU57 520 aaPredicted RBP21.55■■□□□ 1.04
ITGA4-202ENST00000339307 COLGALT2Q8IYK4 626 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 FBXL6Q8N531 539 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 TDRD5Q8NAT2 981 aaKnown RBP21.55■■□□□ 1.04
ITGA4-202ENST00000339307 NACC1Q96RE7 527 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 MIOSQ9NXC5 875 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 KLK14Q9P0G3 267 aa21.55■■□□□ 1.04
ITGA4-202ENST00000339307 SOD2P04179 222 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 OR52Z1P0C646 297 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 AMHR2Q16671 573 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 SLC27A1Q6PCB7 646 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 ZBTB8OSQ8IWT0 167 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 MCPH1Q8NEM0 835 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 COLEC11Q9BWP8 271 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 SFXN1Q9H9B4 322 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 LIMD1Q9UGP4 676 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 SSX2IPQ9Y2D8 614 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 GIT1Q9Y2X7 761 aa21.54■■□□□ 1.04
ITGA4-202ENST00000339307 MUC6Q6W4X9 2439 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 ARHGEF35A5YM69 484 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 CLCN4P51793 760 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 MTMR3Q13615 1198 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 IER5LQ5T953 404 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 POTEGQ6S5H5 508 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 RPS6KC1Q96S38 1066 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 LLPHQ9BRT6 129 aaKnown RBP21.53■■□□□ 1.04
ITGA4-202ENST00000339307 NFKBIZQ9BYH8 718 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 MARCH5Q9NX47 278 aa21.53■■□□□ 1.04
ITGA4-202ENST00000339307 F8W810 466 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 ASGR2P07307 311 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 GLUD2P49448 558 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 TTC38Q5R3I4 469 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 FEZF2Q8TBJ5 459 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 RABGGTAQ92696 567 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 ZSCAN31Q96LW9 406 aaPredicted RBP21.52■■□□□ 1.04
ITGA4-202ENST00000339307 POLR3CQ9BUI4 534 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms