RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CLDN3O15551 220 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 GPR32O75388 356 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 FGBP02675 491 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 EEF1GP26641 437 aaKnown RBP5.65□□□□□ -1.51
LRIT3-201ENST00000327908 PSMC2P35998 433 aaKnown RBP5.65□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF445P59923 1031 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 MDM2Q00987 491 aaPredicted RBP5.65□□□□□ -1.51
LRIT3-201ENST00000327908 MBTD1Q05BQ5 628 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 NFKBIBQ15653 356 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 MARCH8Q5T0T0 291 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 PPP1R2P3Q6NXS1 205 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 GLB1LQ6UWU2 654 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 SLC24A5Q71RS6 500 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 FRMD5Q7Z6J6 570 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 ABI1Q8IZP0 508 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 GPD1LQ8N335 351 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 XXYLT1Q8NBI6 393 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 STRA6Q9BX79 667 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 TMEM117Q9H0C3 514 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 LMAN2LQ9H0V9 348 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 RPF1Q9H9Y2 349 aaKnown RBP5.65□□□□□ -1.51
LRIT3-201ENST00000327908 RGS18Q9NS28 235 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 MAN1B1Q9UKM7 699 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 UMODL1Q5DID0 1318 aa5.65□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF233A6NK53 670 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ITGA4P13612 1032 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 LIG1P18858 919 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 RPL9P32969 192 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 MNX1P50219 401 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 PSMC6P62333 389 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 FAAP100Q0VG06 881 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ZC3H3Q8IXZ2 948 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 BEST2Q8NFU1 509 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ASAP3Q8TDY4 903 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 DPF3Q92784 378 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 TMEM143Q96AN5 459 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ZFP91Q96JP5 570 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 GDPD2Q9HCC8 539 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 MAFFQ9ULX9 164 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 PCDHB7Q9Y5E2 793 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 PCDHA5Q9Y5H7 936 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ZC3H11AO75152 810 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 TNNC2P02585 160 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 CHMP4BP1P59074 171 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 MYL5Q02045 173 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 DSC3Q14574 896 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 LRRC26Q2I0M4 334 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF568Q3ZCX4 644 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 SPATA1Q5VX52 437 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 CENPPQ6IPU0 288 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 DYMQ7RTS9 669 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ADSSL1Q8N142 457 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 DHX38Q92620 1227 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 LENG1Q96BZ8 264 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ACAP3Q96P50 834 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ACO2Q99798 780 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 TCHPQ9BT92 498 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 IFIH1Q9BYX4 1025 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 IMPG2Q9BZV3 1241 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 C2CD2Q9Y426 696 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 GRIN2DO15399 1336 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 A0A087WZ62 844 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 A0A1B0GUA9 196 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 KLRC4O43908 158 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 RB1P06400 928 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 TPM1P09493 284 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 LAG3P18627 525 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ATICP31939 592 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 MCCD1P59942 119 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 FAM189BP81408 668 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 GRIN1Q05586 938 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 GRIK3Q13003 919 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 TWF2Q6IBS0 349 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 RTL10Q7L3V2 364 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ENOSF1Q7L5Y1 443 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 C7orf61Q8IZ16 206 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 PPP2R3CQ969Q6 453 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 ANKRD36BP1Q96IX9 119 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 FNBP1Q96RU3 617 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 FDXACB1Q9BRP7 624 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 MSTO1Q9BUK6 570 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 DSEQ9UL01 958 aa5.64□□□□□ -1.51
LRIT3-201ENST00000327908 UBQLN1Q9UMX0 589 aaKnown RBP5.64□□□□□ -1.51
LRIT3-201ENST00000327908 SLC16A4O15374 487 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 TRAPPC3O43617 180 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 NRDCO43847 1150 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 SORBS3O60504 671 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 CCDC172P0C7W6 258 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 SRGAP2CP0DJJ0 459 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 MARSP56192 900 aaKnown RBP5.63□□□□□ -1.51
LRIT3-201ENST00000327908 CUL4BQ13620 913 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 TRIM14Q14142 442 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 ECM1Q16610 540 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 SPECC1Q5M775 1068 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 FKBP15Q5T1M5 1219 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF618Q5T7W0 954 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 LRSAM1Q6UWE0 723 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 KCNK18Q7Z418 384 aa5.63□□□□□ -1.51
LRIT3-201ENST00000327908 BRSK2Q8IWQ3 736 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms