RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 IPPQ9Y573 584 aa19.45■□□□□ 0.7
EXOSC4-201ENST00000316052 DMDP11532 3685 aa19.45■□□□□ 0.7
EXOSC4-201ENST00000316052 C2orf16Q68DN1 1984 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 BTBD18B2RXH4 712 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 ERLIN2O94905 339 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 LYPLA2O95372 231 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 ITGA4P13612 1032 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 KLRC2P26717 231 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 ARL2P36404 184 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 CLCN4P51793 760 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 MXD4Q14582 209 aaPredicted RBP19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 CALCRLQ16602 461 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 AMHR2Q16671 573 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 PPFIBP1Q86W92 1011 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 COLGALT2Q8IYK4 626 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 ZDHHC14Q8IZN3 488 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 NSUN7Q8NE18 718 aaKnown RBP19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 GTF3C6Q969F1 213 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 GAD1Q99259 594 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 PRRX2Q99811 253 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 MARCH5Q9NX47 278 aa19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 DBR1Q9UK59 544 aaKnown RBP19.44■□□□□ 0.7
EXOSC4-201ENST00000316052 PTPRZ1P23471 2315 aaPredicted RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 ARL5CA6NH57 179 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 INPPL1O15357 1258 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 JAK2O60674 1132 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 MBTD1Q05BQ5 628 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 MTMR3Q13615 1198 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 CAPSQ13938 189 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 GPR149Q86SP6 731 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 IFNLR1Q8IU57 520 aaPredicted RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 UBALD2Q8IYN6 164 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 TDRD5Q8NAT2 981 aaKnown RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 CNNM3Q8NE01 707 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 ZFP42Q96MM3 310 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 MTMR9Q96QG7 549 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 EMILIN2Q9BXX0 1053 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 TTC12Q9H892 705 aaPredicted RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 UBN1Q9NPG3 1134 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 MRPL17Q9NRX2 175 aaKnown RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 ANKEF1Q9NU02 776 aa19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 PRG3Q9Y2Y8 225 aaPredicted RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 TDRD15B5MCY1 1934 aaKnown RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 RIF1Q5UIP0 2472 aaKnown RBP19.43■□□□□ 0.7
EXOSC4-201ENST00000316052 DENND4AQ7Z401 1863 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 F8W810 466 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 INO80B-WBP1J3KQ70 363 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 C2CD2LO14523 706 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 EFEMP2O95967 443 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 AXLP30530 894 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 MLH1P40692 756 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 TXKP42681 527 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 FOSBP53539 338 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 POU5F1BQ06416 359 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 NOTUMQ6P988 496 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 PIGOQ8TEQ8 1089 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 CSRNP2Q9H175 543 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 BRMS1Q9HCU9 246 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 STK39Q9UEW8 545 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 USTQ9Y2C2 406 aa19.42■□□□□ 0.7
EXOSC4-201ENST00000316052 B4GALT5O43286 388 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 DGAT1O75907 488 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 SOD2P04179 222 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 ARF4P18085 180 aaPredicted RBP19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 GLRA2P23416 452 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 OR1G1P47890 313 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 RARRES1P49788 294 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 SCNN1GP51170 649 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 DSC1Q08554 894 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 TFDP1Q14186 410 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 PCBP1Q15365 356 aaKnown RBP eCLIP19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 DIS3L2Q8IYB7 885 aaKnown RBP19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 CCDC51Q96ER9 411 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 APOL6Q9BWW8 343 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 TMEM60Q9H2L4 133 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 SFXN1Q9H9B4 322 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 PLXNA3P51805 1871 aa19.41■□□□□ 0.7
EXOSC4-201ENST00000316052 NEMFO60524 1076 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 ST3GAL1Q11201 340 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 KIAA0319Q5VV43 1072 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 CDR2LQ86X02 465 aaPredicted RBP19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 RNF168Q8IYW5 571 aaPredicted RBP19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 PLCD3Q8N3E9 789 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 GSTCDQ8NEC7 633 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 RPS6KC1Q96S38 1066 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 HERC2P3Q9BVR0 1158 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 NXF3Q9H4D5 531 aaKnown RBP19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 FAM86C1Q9NVL1 165 aa19.4■□□□□ 0.7
EXOSC4-201ENST00000316052 POTEMA6NI47 508 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 TEX28O15482 410 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 SPATA31C1P0DKV0 1188 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 AKAP5P24588 427 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 NEK4P51957 841 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 NCBP1Q09161 790 aaKnown RBP19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 NFKBIZQ9BYH8 718 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 GIT1Q9Y2X7 761 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 DOCK6Q96HP0 2047 aa19.39■□□□□ 0.69
EXOSC4-201ENST00000316052 SPDYE4A6NLX3 237 aa19.38■□□□□ 0.69
EXOSC4-201ENST00000316052 URODP06132 367 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms