RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 TMEM169Q96HH4 297 aa9.36□□□□□ -0.91
MSL3-201ENST00000312196 TCF25Q9BQ70 676 aa9.36□□□□□ -0.91
MSL3-201ENST00000312196 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
MSL3-201ENST00000312196 RAB34Q9BZG1 259 aa9.36□□□□□ -0.91
MSL3-201ENST00000312196 C17orf75Q9HAS0 396 aa9.36□□□□□ -0.91
MSL3-201ENST00000312196 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.36□□□□□ -0.91
MSL3-201ENST00000312196 RGL1Q9NZL6 768 aa9.36□□□□□ -0.91
MSL3-201ENST00000312196 FNIP2Q9P278 1114 aa9.36□□□□□ -0.91
MSL3-201ENST00000312196 LAMA3Q16787 3333 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 TRANK1O15050 2925 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 A0A1B0GUA9 196 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 JAK2O60674 1132 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 GLRA2P23416 452 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 CAPSQ13938 189 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 CTTNQ14247 550 aaKnown RBP9.35□□□□□ -0.91
MSL3-201ENST00000312196 TTC38Q5R3I4 469 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 PDXDC1Q6P996 788 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 SMG8Q8ND04 991 aaKnown RBP9.35□□□□□ -0.91
MSL3-201ENST00000312196 KIFAP3Q92845 792 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 TSPAN18Q96SJ8 248 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 COLEC11Q9BWP8 271 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 EMILIN2Q9BXX0 1053 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
MSL3-201ENST00000312196 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 ERLIN2O94905 339 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 ALDH2P05091 517 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 GTF2F1P35269 517 aaKnown RBP eCLIP9.34□□□□□ -0.91
MSL3-201ENST00000312196 DCAF4L1Q3SXM0 396 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 SLC27A1Q6PCB7 646 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 ZBTB8OSQ8IWT0 167 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 COLGALT2Q8IYK4 626 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 IGSF22Q8N9C0 903 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 RNF149Q8NC42 400 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 ASAP3Q8TDY4 903 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TMEM143Q96AN5 459 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 NLRP4Q96MN2 994 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TMEM134Q9H6X4 195 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 ENTPD7Q9NQZ7 604 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 KCND2Q9NZV8 630 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TMEM150BA6NC51 233 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TMEM189-UBE2V1I3L0A0 370 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 CXCL14O95715 111 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 SOD2P04179 222 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TECP42680 631 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 TXKP42681 527 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 SLC11A1P49279 550 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 GRIK3Q13003 919 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 MTMR3Q13615 1198 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 CATSPER3Q86XQ3 398 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 BARX2Q9UMQ3 279 aaPredicted RBP9.34□□□□□ -0.91
MSL3-201ENST00000312196 IPPQ9Y573 584 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
MSL3-201ENST00000312196 ACKR2O00590 384 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 NR1I2O75469 434 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 SEC24BO95487 1268 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 BRD1O95696 1058 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 BMP15O95972 392 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 PAX3P23760 479 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 ABCD1P33897 745 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 PTPN14Q15678 1187 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 ARL6IP4Q66PJ3 421 aaKnown RBP9.33□□□□□ -0.92
MSL3-201ENST00000312196 C15orf39Q6ZRI6 1047 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 FAM184AQ8NB25 1140 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 MICAL1Q8TDZ2 1067 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 UROC1Q96N76 676 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 KLHL5Q96PQ7 755 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 POLR3FQ9H1D9 316 aaPredicted RBP9.33□□□□□ -0.92
MSL3-201ENST00000312196 SFXN1Q9H9B4 322 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.33□□□□□ -0.92
MSL3-201ENST00000312196 FAN1Q9Y2M0 1017 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 ZNF318Q5VUA4 2279 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 MED24O75448 989 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 FGFR4P22455 802 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 DSG1Q02413 1049 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 RILPL1Q5EBL4 403 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 XKR4Q5GH76 650 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 TMC7Q7Z402 723 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 KSR1Q8IVT5 923 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 CCDC83Q8IWF9 413 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 FAM193BQ96PV7 902 aaPredicted RBP9.33□□□□□ -0.92
MSL3-201ENST00000312196 PPP1R16BQ96T49 567 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 RTP3Q9BQQ7 232 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 CHST7Q9NS84 486 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 IGSF9Q9P2J2 1179 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
MSL3-201ENST00000312196 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
MSL3-201ENST00000312196 ARHGEF35A5YM69 484 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 SRGAP2CP0DJJ0 459 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 ELAVL2Q12926 359 aaKnown RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 ATAT1Q5SQI0 421 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 KIAA0319Q5VV43 1072 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 PLPP4Q5VZY2 271 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 ASTLQ6HA08 431 aaPredicted RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 PADI6Q6TGC4 694 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 OTOP3Q7RTS5 596 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms