RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 ZNF500O60304 480 aaPredicted RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 FAM107AO95990 144 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 CAPN1P07384 714 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 GNAT1P11488 350 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 PSMC5P62195 406 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 PDAP1Q13442 181 aaKnown RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 EXOC4Q96A65 974 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 FHDC1Q9C0D6 1143 aaPredicted RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 LDHAP00338 332 aaKnown RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 RALBP11234 206 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 ENO3P13929 434 aaPredicted RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 TCN1P20061 433 aaPredicted RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 CLK1P49759 484 aaKnown RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 HPCAP84074 193 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 ALDH6A1Q02252 535 aaKnown RBP16.73■□□□□ 0.27
PPM1E-201ENST00000308249 SGO1Q5FBB7 561 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 GALNT4Q8N4A0 578 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 PARVBQ9HBI1 364 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
PPM1E-201ENST00000308249 SEMA3EO15041 775 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
PPM1E-201ENST00000308249 PID1Q7Z2X4 250 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 E2F8A0AVK6 867 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 HIC1Q14526 733 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 ITPRIPL1Q6GPH6 555 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 BBS7Q8IWZ6 715 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 C17orf80Q9BSJ5 609 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
PPM1E-201ENST00000308249 BFARQ9NZS9 450 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 BTBD8Q5XKL5 378 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 RHPN2Q8IUC4 686 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 RIN3Q8TB24 985 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 NUP85Q9BW27 656 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 TJP2Q9UDY2 1190 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 GYS1P13807 737 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 NUP62P37198 522 aaPredicted RBP16.72■□□□□ 0.27
PPM1E-201ENST00000308249 RCSD1Q6JBY9 416 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 NUDT18Q6ZVK8 323 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 ANKMY2Q8IV38 441 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 MAGEB10Q96LZ2 347 aaPredicted RBP16.72■□□□□ 0.27
PPM1E-201ENST00000308249 FOPNLQ96NB1 174 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 RASSF9O75901 435 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 HMBSP08397 361 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 PGM1P36871 562 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 FBXO18Q8NFZ0 1043 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
PPM1E-201ENST00000308249 GREM2Q9H772 168 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 NSMCE4AQ9NXX6 385 aa16.72■□□□□ 0.27
PPM1E-201ENST00000308249 CDH2P19022 906 aaPredicted RBP16.71■□□□□ 0.27
PPM1E-201ENST00000308249 TADA1Q96BN2 335 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 AGAP3Q96P47 875 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 BRIP1Q9BX63 1249 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 MAN1C1Q9NR34 630 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 CSE1LP55060 971 aaKnown RBP16.71■□□□□ 0.27
PPM1E-201ENST00000308249 SHROOM1Q2M3G4 852 aaPredicted RBP16.71■□□□□ 0.27
PPM1E-201ENST00000308249 SARM1Q6SZW1 724 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 IL1RL2Q9HB29 575 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 PKP3Q9Y446 797 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 CHUKO15111 745 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 TMED10P49755 219 aaKnown RBP16.71■□□□□ 0.27
PPM1E-201ENST00000308249 MAPK6Q16659 721 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 CCDC103Q8IW40 242 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 UTP6Q9NYH9 597 aaKnown RBP16.71■□□□□ 0.27
PPM1E-201ENST00000308249 ABCC1P33527 1531 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 CCNE1P24864 410 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 GGCXP38435 758 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 SLC44A4Q53GD3 710 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 PGBD4Q96DM1 585 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
PPM1E-201ENST00000308249 RNF103O00237 685 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 DEFA1P59665 94 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 DEFA3P59666 94 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 GPC5P78333 572 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 TNFAIP2Q03169 654 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 USP33Q8TEY7 942 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 SH3GL1Q99961 368 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 FAM129AQ9BZQ8 928 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 USP44Q9H0E7 712 aa16.71■□□□□ 0.27
PPM1E-201ENST00000308249 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.26
PPM1E-201ENST00000308249 BCAR1P56945 870 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 ABCE1P61221 599 aaKnown RBP16.7■□□□□ 0.26
PPM1E-201ENST00000308249 ZNF746Q6NUN9 644 aaPredicted RBP16.7■□□□□ 0.26
PPM1E-201ENST00000308249 HEATR4Q86WZ0 1026 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
PPM1E-201ENST00000308249 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
PPM1E-201ENST00000308249 SNAPC4Q5SXM2 1469 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 MYO1CO00159 1063 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 ST8SIA6P61647 398 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 SESN1Q9Y6P5 492 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 C16orf96A6NNT2 1141 aa16.7■□□□□ 0.26
PPM1E-201ENST00000308249 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms