RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 NME3Q13232 169 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 NAA30Q147X3 362 aaPredicted RBP18.34■□□□□ 0.53
CDCP1-201ENST00000296129 SDCCAG3Q96C92 435 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 THOC1Q96FV9 657 aaKnown RBP18.34■□□□□ 0.53
CDCP1-201ENST00000296129 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 EDEM3Q9BZQ6 932 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 VCX3AQ9NNX9 186 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 PARVAQ9NVD7 372 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 DDX56Q9NY93 547 aaKnown RBP18.34■□□□□ 0.53
CDCP1-201ENST00000296129 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 COPEO14579 308 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 GGPS1O95749 300 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 KRT7P08729 469 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 MID2Q9UJV3 735 aa18.34■□□□□ 0.53
CDCP1-201ENST00000296129 XKR3Q5GH77 459 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 CCDC137Q6PK04 289 aaKnown RBP18.33■□□□□ 0.53
CDCP1-201ENST00000296129 PDCD7Q8N8D1 485 aaKnown RBP18.33■□□□□ 0.53
CDCP1-201ENST00000296129 C1orf54Q8WWF1 131 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 DHX38Q92620 1227 aaKnown RBP18.33■□□□□ 0.53
CDCP1-201ENST00000296129 PFASO15067 1338 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 RTN2O75298 545 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 DGAT1O75907 488 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 PAMP19021 973 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 CCZ1BP86790 482 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 CCZ1P86791 482 aaPredicted RBP18.33■□□□□ 0.53
CDCP1-201ENST00000296129 APEX2Q9UBZ4 518 aa18.33■□□□□ 0.53
CDCP1-201ENST00000296129 GPS1Q13098 491 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 NR1I3Q14994 352 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 HP1BP3Q5SSJ5 553 aaPredicted RBP18.33■□□□□ 0.52
CDCP1-201ENST00000296129 MFSD14CQ5VZR4 134 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 KLC3Q6P597 504 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 ZNF449Q6P9G9 518 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 FSD1LQ9BXM9 530 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 ITIH6Q6UXX5 1313 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 KRT14P02533 472 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 ACOT2P49753 483 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 ELAC2Q9BQ52 826 aaKnown RBP18.33■□□□□ 0.52
CDCP1-201ENST00000296129 MYOZ2Q9NPC6 264 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 ABCF3Q9NUQ8 709 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 PLA2G4FQ68DD2 849 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 POLIQ9UNA4 740 aa18.33■□□□□ 0.52
CDCP1-201ENST00000296129 MAP2K2P36507 400 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 SPARCL1Q14515 664 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 TRIM59Q8IWR1 403 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 KAZALD1Q96I82 304 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 ACAP3Q96P50 834 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 AGPAT5Q9NUQ2 364 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 SLC26A4O43511 780 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 ROR1Q01973 937 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 HVCN1Q96D96 273 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 TAF1DQ9H5J8 278 aaPredicted RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 NR3C2P08235 984 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 FMO5P49326 533 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 GRIN1Q05586 938 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 TAF1BQ53T94 588 aaPredicted RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 NOP9Q86U38 636 aaKnown RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 TTC25Q96NG3 672 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 MAGOHP61326 146 aaKnown RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 SNF8Q96H20 258 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 GGA3Q9NZ52 723 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 ZNF185O15231 689 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 KYAT1Q16773 422 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 EPM2AIP1Q7L775 607 aaPredicted RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 TTC39CQ8N584 583 aa18.32■□□□□ 0.52
CDCP1-201ENST00000296129 RBM46Q8TBY0 533 aaKnown RBP18.32■□□□□ 0.52
CDCP1-201ENST00000296129 LCP1P13796 627 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 AP1B1Q10567 949 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 C1orf228Q6PIY5 440 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 STK33Q9BYT3 514 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 PITPNM3Q9BZ71 974 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 EPS15L1Q9UBC2 864 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 IL1RL1Q01638 556 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 KLHL38Q2WGJ6 581 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 TRIM67Q6ZTA4 783 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 AFG1LQ8WV93 481 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 MXRA8Q9BRK3 442 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 TUBB6Q9BUF5 446 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 HSPA4LO95757 839 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 EMC2Q15006 297 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 R3HDM1Q15032 1099 aaKnown RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 SRRM1Q8IYB3 904 aaKnown RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 AGBL1Q96MI9 1066 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 ZBED2Q9BTP6 218 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 FAM187AA6NFU0 413 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 TTC36A6NLP5 189 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 PIK3R2O00459 728 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 DPEP1P16444 411 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 GMPSP49915 693 aaPredicted RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 TMPRSS15P98073 1019 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 HEATR6Q6AI08 1181 aaKnown RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 DHX35Q9H5Z1 703 aaKnown RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 KCND2Q9NZV8 630 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms