RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 EXTL3O43909 919 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 MSCO60682 206 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 ACTN1P12814 892 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 APBA1Q02410 837 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 PTK2Q05397 1052 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 PLCB4Q15147 1175 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 SKIDA1Q1XH10 827 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 ZSWIM2Q8NEG5 633 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 PPTC7Q8NI37 304 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 RABGGTAQ92696 567 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 FAM81BQ96LP2 452 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 KMT5AQ9NQR1 393 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 TRIM10Q9UDY6 481 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 JRKLQ9Y4A0 524 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 ADCY3O60266 1144 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
SEC24D-201ENST00000280551 IER5Q5VY09 327 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 HELQQ8TDG4 1101 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 SHC3Q92529 594 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 POLR3FQ9H1D9 316 aaPredicted RBP11.04□□□□□ -0.64
SEC24D-201ENST00000280551 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 HOXC8P31273 242 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 RPGRIP1Q96KN7 1286 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 LZTFL1Q9NQ48 299 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 NAGPAQ9UK23 515 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
SEC24D-201ENST00000280551 SAMM50Q9Y512 469 aa11.04□□□□□ -0.64
SEC24D-201ENST00000280551 A0A087X0T9 212 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 TISP43B9A030 160 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 PDHXO00330 501 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 FAM228BP0C875 321 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 TCF7P36402 384 aaPredicted RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 MYL7Q01449 175 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 GCNT1Q02742 428 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 CAPSQ13938 189 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 ASIC2Q16515 512 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 CST9Q5W186 159 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 NCAPG2Q86XI2 1143 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 GPD1LQ8N335 351 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 CEP112Q8N8E3 955 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 LNX1Q8TBB1 728 aaPredicted RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 HNRNPLLQ8WVV9 542 aaKnown RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 IFIH1Q9BYX4 1025 aaKnown RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 ISCUQ9H1K1 167 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 FZD8Q9H461 694 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 SNAI1O95863 264 aaPredicted RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 STAT5BP51692 787 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 ARHGAP29Q52LW3 1261 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 FAM102BQ5T8I3 360 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 NRBP2Q9NSY0 501 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 CITO14578 2027 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 DDX3XO00571 662 aaKnown RBP eCLIP11.03□□□□□ -0.642e-7■■□□□ 12.8
SEC24D-201ENST00000280551 C4BPAP04003 597 aaKnown RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 CCNA1P78396 465 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 ZNF569Q5MCW4 686 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 GBA2Q9HCG7 927 aaPredicted RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 TMEM51Q9NW97 253 aa11.03□□□□□ -0.64
SEC24D-201ENST00000280551 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
SEC24D-201ENST00000280551 STAT1P42224 750 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 EFNA5P52803 228 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 GFPT1Q06210 699 aaPredicted RBP11.02□□□□□ -0.64
SEC24D-201ENST00000280551 MCL1Q07820 350 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 PRKG1Q13976 671 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 PLS1Q14651 629 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 ARMCX2Q7L311 632 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 GPR161Q8N6U8 529 aaKnown RBP11.02□□□□□ -0.64
SEC24D-201ENST00000280551 SCFD2Q8WU76 684 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 POLD4Q9HCU8 107 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 TSKSQ9UJT2 592 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 TMEM59LQ9UK28 342 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 SNX12Q9UMY4 172 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 CAPN6Q9Y6Q1 641 aa11.02□□□□□ -0.64
SEC24D-201ENST00000280551 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 C22orf31O95567 290 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 GGPS1O95749 300 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 KCTD2Q14681 263 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 LY6KQ17RY6 165 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 CCDC122Q5T0U0 273 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 MEI1Q5TIA1 1274 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 SLFN12LQ6IEE8 588 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 ENOSF1Q7L5Y1 443 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 CREG2Q8IUH2 290 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 TCP11Q8WWU5 503 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.02□□□□□ -0.65
SEC24D-201ENST00000280551 EXOC3O60645 756 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 LAMC2Q13753 1193 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 MXD4Q14582 209 aaPredicted RBP11.02□□□□□ -0.65
SEC24D-201ENST00000280551 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 ZACNQ401N2 412 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 ZNF484Q5JVG2 852 aa11.02□□□□□ -0.65
SEC24D-201ENST00000280551 CACNA2D4Q7Z3S7 1137 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms