RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TRIM33Q9UPN9 1127 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 ATP11BQ9Y2G3 1177 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 PTPRTO14522 1441 aa17.82■□□□□ 0.44
TSPAN3-201ENST00000267970 RABGAP1LQ5R372 815 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 ANO5Q75V66 913 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 SLC17A8Q8NDX2 589 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 CLMNQ96JQ2 1002 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 TYK2P29597 1187 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 DYNC1I2Q13409 638 aaKnown RBP17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 CEP55Q53EZ4 464 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 TMEM154Q6P9G4 183 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 CHCHD3Q9NX63 227 aaKnown RBP17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 GPC3P51654 580 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 SH3GL3Q99963 347 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 ASNSD1Q9NWL6 643 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 MID2Q9UJV3 735 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 ATP8B3O60423 1300 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 VAMP7P51809 220 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 LRRC74AQ0VAA2 488 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 PWP1Q13610 501 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 HEATR6Q6AI08 1181 aaKnown RBP17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 CPA5Q8WXQ8 436 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 PAWRQ96IZ0 340 aaKnown RBP17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 CHP1Q99653 195 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■■■□ 20.1
TSPAN3-201ENST00000267970 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 EHD2Q9NZN4 543 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 CCDC188H7C350 402 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 THEMIS2Q5TEJ8 643 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 SNF8Q96H20 258 aa17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 LIMA1Q9UHB6 759 aaKnown RBP17.81■□□□□ 0.44
TSPAN3-201ENST00000267970 SHCBP1LQ9BZQ2 653 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 SLC9A2Q9UBY0 812 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 CNGA3Q16281 694 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 CCDC17Q96LX7 622 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 ADD3Q9UEY8 706 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 PYGLP06737 847 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 SEPT2Q15019 361 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 KLHL38Q2WGJ6 581 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 FAM102AQ5T9C2 384 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 LAYNQ6UX15 382 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 TEKT4Q8WW24 435 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 ASZ1Q8WWH4 475 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 RBM41Q96IZ5 413 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 MLH3Q9UHC1 1453 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 CYP26A1O43174 497 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 AKAP10O43572 662 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 KRT4P19013 534 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 SWSAP1Q6NVH7 229 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 ADGRG1Q9Y653 693 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 KDM5AP29375 1690 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 RNF219Q5W0B1 726 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 ADCK1Q86TW2 530 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 SH3KBP1Q96B97 665 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 RNPEPQ9H4A4 650 aa17.8■□□□□ 0.44
TSPAN3-201ENST00000267970 LINC00854A0A1B0GVQ3 168 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 USP14P54578 494 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 SPDYAQ5MJ70 313 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 ARHGEF25Q86VW2 580 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 KRT75O95678 551 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 MYBP10242 640 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 KLK7P49862 253 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 AIPL1Q9NZN9 384 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 KIZQ2M2Z5 673 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 PGBD4Q96DM1 585 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 ABHD8Q96I13 439 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 KCNN4O15554 427 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 TDP2O95551 362 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 CHRNA3P32297 505 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 KCNF1Q9H3M0 494 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 GUCY1A2P33402 732 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 SP110Q9HB58 689 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 ZNF518AQ6AHZ1 1483 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 PRDX5P30044 214 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 PLIN5Q00G26 463 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 PTK2BQ14289 1009 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 HLFQ16534 295 aa17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 CDV3Q9UKY7 258 aaKnown RBP17.79■□□□□ 0.44
TSPAN3-201ENST00000267970 ADGRA2Q96PE1 1338 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 CDH6P55285 790 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 NLRP10Q86W26 655 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 FMR1NBQ8N0W7 255 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 WDR47O94967 919 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 RERGLQ9H628 205 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 AIM2O14862 343 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 ATMINO43313 823 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 MAP4P27816 1152 aaKnown RBP17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 HIC1Q14526 733 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms