RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 PPFIA2O75334 1257 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 UCHL3P15374 230 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 RAVER2Q9HCJ3 691 aaKnown RBP16.87■□□□□ 0.29
SHTN1-201ENST00000260777 APEX2Q9UBZ4 518 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 LPXNO60711 386 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 ACTN3Q08043 901 aaPredicted RBP16.87■□□□□ 0.29
SHTN1-201ENST00000260777 TRMT10CQ7L0Y3 403 aaKnown RBP16.87■□□□□ 0.29
SHTN1-201ENST00000260777 VPS39Q96JC1 886 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 TDRD3Q9H7E2 651 aaKnown RBP16.87■□□□□ 0.29
SHTN1-201ENST00000260777 PARVAQ9NVD7 372 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 UVRAGQ9P2Y5 699 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 FBXO40Q9UH90 709 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 CNTNAP5Q8WYK1 1306 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 MYMKA6NI61 221 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHTN1-201ENST00000260777 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 HAUS6Q7Z4H7 955 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 SLC35G2Q8TBE7 412 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 CCT8L2Q96SF2 557 aa16.87■□□□□ 0.29
SHTN1-201ENST00000260777 RBM12Q9NTZ6 932 aaKnown RBP16.87■□□□□ 0.29
SHTN1-201ENST00000260777 STXBP3O00186 592 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 PAMP19021 973 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 ZNF34Q8IZ26 560 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 SYN2Q92777 582 aaPredicted RBP16.86■□□□□ 0.29
SHTN1-201ENST00000260777 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 MTMR4Q9NYA4 1195 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 FGFR4P22455 802 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 MARK3P27448 753 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 PIP4K2CQ8TBX8 421 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■■■■■ 62.8
SHTN1-201ENST00000260777 TTC1Q99614 292 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 GALCP54803 685 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 SPATA21Q7Z572 469 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 CPSF3Q9UKF6 684 aaKnown RBP16.86■□□□□ 0.29
SHTN1-201ENST00000260777 GSTA4O15217 222 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 C1orf146Q5VVC0 180 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 ACAD11Q709F0 780 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 PRPF31Q8WWY3 499 aaKnown RBP16.86■□□□□ 0.29
SHTN1-201ENST00000260777 ZNF302Q9NR11 478 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 ARL2BPQ9Y2Y0 163 aa16.86■□□□□ 0.29
SHTN1-201ENST00000260777 ECE2O60344 883 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 CHEK2O96017 543 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 NMT1P30419 496 aaKnown RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SH2D3CQ8N5H7 860 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 ERGIC2Q96RQ1 377 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 FUCA2Q9BTY2 467 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SUDS3Q9H7L9 328 aaPredicted RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SENP2Q9HC62 589 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 TRIM33Q9UPN9 1127 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 TYW5A2RUC4 315 aaKnown RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 PSMC1P62191 440 aaKnown RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 ROR1Q01973 937 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 ZNF568Q3ZCX4 644 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 TRIM67Q6ZTA4 783 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 PPM1NQ8N819 430 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 POLR3FQ9H1D9 316 aaPredicted RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 DCTN4Q9UJW0 460 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 HEY1Q9Y5J3 304 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SDC4P31431 198 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 PHEXP78562 749 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SF3B3Q15393 1217 aaKnown RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 SKA2Q8WVK7 121 aaPredicted RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 CCDC138Q96M89 665 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 MRPL40Q9NQ50 206 aaKnown RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 KCND2Q9NZV8 630 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 HNRNPCL1O60812 293 aaKnown RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 PHKA2P46019 1235 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 COPS2P61201 443 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 AP2B1P63010 937 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 PTPAQ15257 358 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
SHTN1-201ENST00000260777 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
SHTN1-201ENST00000260777 KIAA0391O15091 583 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 FMO5P49326 533 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 ASAP2O43150 1006 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 MMP10P09238 476 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 ZSCAN20P17040 1043 aaPredicted RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 ITIH2P19823 946 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 PRMT1Q99873 361 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 CYP26A1O43174 497 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 FDX1P10109 184 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 TMCO4Q5TGY1 634 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 CDKL3Q8IVW4 592 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms