RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 RGL4Q8IZJ4 473 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TUBGCP2Q9BSJ2 902 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 APOL5Q9BWW9 433 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 RWDD3Q9Y3V2 267 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TMCC1O94876 653 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 CHRNA5P30532 468 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 SIK1P57059 783 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 MTBPQ96DY7 904 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 NSMCE4AQ9NXX6 385 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 TRPM2O94759 1503 aa11.75□□□□□ -0.53
MSH6-201ENST00000234420 ASAP2O43150 1006 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 INAQ16352 499 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 ARL13BQ3SXY8 428 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 SYTL3Q4VX76 610 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 CENPUQ71F23 418 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 RD3Q7Z3Z2 195 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 IPCEF1Q8WWN9 437 aaPredicted RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 TMEM87BQ96K49 555 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 KRT87PA6NCN2 255 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 KRT1P04264 644 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 NFKBIAP25963 317 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 MRPS35P82673 323 aaKnown RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 SFR1Q86XK3 245 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 AGR3Q8TD06 166 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 EME1Q96AY2 570 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 N6AMT1Q9Y5N5 214 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 MFN2O95140 757 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 HNRNPH1P31943 449 aaKnown RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 SYCP2LQ5T4T6 812 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 ZSCAN10Q96SZ4 725 aaPredicted RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 HEY1Q9Y5J3 304 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 RNF123Q5XPI4 1314 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 ADAM9Q13443 819 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 MICU2Q8IYU8 434 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 CLEC4FQ8N1N0 589 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 SH3BP1Q9Y3L3 701 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 BPIFB4P59827 614 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 CRYMQ14894 314 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 KCTD21Q4G0X4 260 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
MSH6-201ENST00000234420 ARHGAP45Q92619 1136 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 AFF2P51816 1311 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 AKAP10O43572 662 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 AKT1P31749 480 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 G2E3Q7L622 706 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 BNIPLQ7Z465 357 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 PPP1R14BQ96C90 147 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 RMDN1Q96DB5 314 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 MID2Q9UJV3 735 aa11.74□□□□□ -0.53
MSH6-201ENST00000234420 FCER1AP12319 257 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 SCNN1BP51168 640 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 ATP1A4Q13733 1029 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 SPDYAQ5MJ70 313 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 USP17L2Q6R6M4 530 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 CCDC81Q6ZN84 652 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 PNMA1Q8ND90 353 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 TDRD3Q9H7E2 651 aaKnown RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 CTIFO43310 598 aaKnown RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 ALDH18A1P54886 795 aaKnown RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 LRRC41Q15345 812 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 LLGL2Q6P1M3 1020 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 CYFIP2Q96F07 1278 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 DCUN1D1Q96GG9 259 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 NHEJ1Q9H9Q4 299 aaPredicted RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 C16orf96A6NNT2 1141 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 PRPSAP2O60256 369 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 PUDPQ08623 228 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 C16orf72Q14CZ0 275 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 KHDRBS2Q5VWX1 349 aaKnown RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 AHCYL2Q96HN2 611 aaKnown RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 PRG3Q9Y2Y8 225 aaPredicted RBP11.73□□□□□ -0.53
MSH6-201ENST00000234420 ABCB11O95342 1321 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 F8W8V4 182 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 SNPHO15079 494 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 TTLL1O95922 423 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 KRT16P08779 473 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 ME3Q16798 604 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 IRAK1BP1Q5VVH5 260 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
MSH6-201ENST00000234420 ARHGAP22Q7Z5H3 698 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms