RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 DUOXA2Q1HG44 320 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 TRIM59Q8IWR1 403 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 BEST2Q8NFU1 509 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 ELAC2Q9BQ52 826 aaKnown RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 PFASO15067 1338 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 RASA4BC9J798 803 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 RASA4O43374 803 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 RFC1P35251 1148 aaPredicted RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 SOX5P35711 763 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 SPARCL1Q14515 664 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 E2F5Q15329 346 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 PRPF31Q8WWY3 499 aaKnown RBP12.27□□□□□ -0.45
NOD1-201ENST00000222823 SDCCAG3Q96C92 435 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 TXLNGQ9NUQ3 528 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 SLC9A2Q9UBY0 812 aa12.27□□□□□ -0.45
NOD1-201ENST00000222823 ENTPD3O75355 529 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 GYPCP04921 128 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 MYL3P08590 195 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 PDHBP11177 359 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 CHRNA3P32297 505 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 COG2Q14746 738 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 PKN1Q16512 942 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 HHIPL2Q6UWX4 724 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 GPD1LQ8N335 351 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 SPATA4Q8NEY3 305 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 KLHL8Q9P2G9 620 aaPredicted RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 G3BP2Q9UN86 482 aaKnown RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 INPP5FQ9Y2H2 1132 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 FIS1Q9Y3D6 152 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 ATP1A1P05023 1023 aaKnown RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 MMEP08473 750 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 KRT7P08729 469 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 PMLP29590 882 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 CAV1Q03135 178 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 ADGRA1Q86SQ6 560 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 SRRM1Q8IYB3 904 aaKnown RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 C7orf25Q9BPX7 421 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 TUBB6Q9BUF5 446 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 LCMT1Q9UIC8 334 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 PDS5AQ29RF7 1337 aaKnown RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 KRT38O76015 456 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 ESRRAP11474 423 aaPredicted RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 GGCXP38435 758 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 VPS72Q15906 364 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 TRIM72Q6ZMU5 477 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 SPATA33Q96N06 139 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 TEX13BQ9BXU2 312 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 ACTR5Q9H9F9 607 aaPredicted RBP12.26□□□□□ -0.45
NOD1-201ENST00000222823 EPS15L1Q9UBC2 864 aa12.26□□□□□ -0.45
NOD1-201ENST00000222823 TBX3O15119 743 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 YWHABP31946 246 aaKnown RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 STAT5BP51692 787 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 BAATQ14032 418 aaPredicted RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 RASIP1Q5U651 963 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 ATG16L1Q676U5 607 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 LPAR1Q92633 364 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 TTC17Q96AE7 1141 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 JPH1Q9HDC5 661 aaPredicted RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 GRID2IPA4D2P6 1211 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 COPEO14579 308 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 SRGNP10124 158 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 SLC10A5Q5PT55 438 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 TMTC4Q5T4D3 741 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 ZNF449Q6P9G9 518 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 MORC4Q8TE76 937 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 ZCCHC17Q9NP64 241 aaKnown RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 PRR12Q9ULL5 1215 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 STAP1Q9ULZ2 295 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 CNTNAP4Q9C0A0 1308 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 MYMKA6NI61 221 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 M0QYV0 167 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 DGAT1O75907 488 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 EFNA5P52803 228 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 SCN4BQ8IWT1 228 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 TTC39CQ8N584 583 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 RNF149Q8NC42 400 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 WNT8AQ9H1J5 351 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 IP6K2Q9UHH9 426 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 BCAR1P56945 870 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 MAGOHP61326 146 aaKnown RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 TMPRSS15P98073 1019 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 WDR75Q8IWA0 830 aaKnown RBP12.25□□□□□ -0.45
NOD1-201ENST00000222823 MAML1Q92585 1016 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 SLITRK6Q9H5Y7 841 aa12.25□□□□□ -0.45
NOD1-201ENST00000222823 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms