RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Lpgat1Q91YX5 370 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Stox1B2RQL2 990 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sparcl1P70663 650 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Pde1bQ01065 535 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Aars2Q14CH7 980 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Orai3Q6P8G8 290 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Asb11Q9CQ31 323 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Grtp1Q9D3N8 359 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 PnkpQ9JLV6 522 aaKnown RBP18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Mzf1S4R1L6 814 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Gm2030D3Z7C4 212 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Sh3tc1G3X9F6 1346 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Cdk14O35495 469 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 EporP14753 507 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Kif22Q3V300 660 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Akap4Q60662 849 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Daam2Q80U19 1115 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ankzf1Q80UU1 748 aaKnown RBP18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Adrm1Q9JKV1 407 aa18.09■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tex13c2A0A0G2JGA3 530 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ccdc170D3YXL0 722 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Rasal2E9PW37 1286 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Prdm15E9Q8T2 1174 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Tbc1d10aP58802 500 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ccdc51Q3URS9 406 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ccdc110Q3V125 848 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Ccdc25Q78PG9 208 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Cpsf7Q8BTV2 471 aaKnown RBP18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Foxp3Q99JB6 429 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Cfap53Q9D439 514 aa18.08■□□□□ 0.49
Ctcf-201ENSMUST00000005841 Pds5aQ6A026 1332 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm30191A0A0U1RNT7 187 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Kcnk16G5E845 292 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Aff1O88573 1216 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Impdh2P24547 514 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Pik3r1P26450 724 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Psmc2P46471 433 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rps8P62242 208 aaKnown RBP18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rapgef1Q3UHC1 1224 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Scarf1Q5ND28 820 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 PapolaQ61183 739 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ugt1a1Q63886 535 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Zcchc2Q69ZB8 1166 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cdc14aQ6GQT0 603 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Bsdc1Q80Y55 427 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Miga2Q8BK03 593 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Skor1Q8BX46 964 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Scyl2Q8CFE4 930 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Caskin2Q8VHK1 1201 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ccdc88cQ6VGS5 2009 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ttc7bE9Q6P5 843 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Slc14a1Q8VHL0 384 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Nrbp2Q91V36 499 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rnf25Q9QZR0 456 aa18.08■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Myh9Q8VDD5 1960 aaKnown RBP18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Zfp266E9Q2S7 604 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ntrk3Q6VNS1 825 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ddx10Q80Y44 875 aaKnown RBP18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Proser2Q8C5R2 471 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 SfpqQ8VIJ6 699 aaKnown RBP18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Dnajc3Q91YW3 504 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ptdss1Q99LH2 473 aaKnown RBP18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 MlxiplQ99MZ3 864 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Mcur1Q9CXD6 340 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Zc3h7bF8VPP8 982 aaKnown RBP18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Brinp3Q499E0 766 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Wnk4Q80UE6 1222 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Llgl1Q80Y17 1036 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Slc9a9Q8BZ00 644 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ces4aQ8R0W5 563 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Vmn1r64Q8R2B8 320 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ces1Q8VCC2 565 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rex1bdQ9CYZ6 169 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Prl2a1Q9JHK0 228 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Nupr1Q9WTK0 80 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Oip5A2AQ14 241 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Sap30bpQ02614 308 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Acbd3Q8BMP6 525 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Myl6bQ8CI43 207 aa18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ctnnbl1Q9CWL8 563 aaKnown RBP18.07■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm45261A0A1B0GSP6 197 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gm8994E9PV04 411 aaKnown RBP18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Rag1P15919 1040 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 VrtnQ3SYK4 740 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 GnasQ6R0H7 1133 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 D630039A03RikQ8K0M7 236 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Xab2Q9DCD2 855 aaKnown RBP18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Pex11aQ9Z211 246 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Col2a1P28481 1487 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Nfxl1E9Q8I7 918 aaKnown RBP18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Stk38lQ7TSE6 464 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Smndc1Q8BGT7 238 aaKnown RBP18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Cpb2Q9JHH6 422 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Ildr2B5TVM2 661 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Capn6O35646 641 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Gpsm3Q3U1Z5 159 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Zcwpw1Q6IR42 630 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 MslnlQ8C160 685 aa18.06■□□□□ 0.48
Ctcf-201ENSMUST00000005841 Wdr95D3Z7A8 784 aa18.05■□□□□ 0.48
Ctcf-201ENSMUST00000005841 LipeP54310 759 aa18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 89.9 ms