RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W OCA2P53949 197 aa3.4□□□□□ -1.87
SCD6YPR129W ALG11P53954 548 aaKnown RBP3.4□□□□□ -1.87
SCD6YPR129W HXT11P54862 567 aa3.4□□□□□ -1.87
SCD6YPR129W PFA5Q03289 374 aa3.4□□□□□ -1.87
SCD6YPR129W PKR1Q03880 122 aaKnown RBP3.4□□□□□ -1.87
SCD6YPR129W YDR391CQ04170 232 aa3.4□□□□□ -1.87
SCD6YPR129W MYO5Q04439 1219 aaKnown RBP3.4□□□□□ -1.87
SCD6YPR129W AIM33Q04516 312 aa3.4□□□□□ -1.87
SCD6YPR129W RIF2Q06208 395 aa3.4□□□□□ -1.87
SCD6YPR129W YPL199CQ08954 240 aa3.4□□□□□ -1.87
SCD6YPR129W SLF1Q12034 447 aaKnown RBP3.4□□□□□ -1.87
SCD6YPR129W FCF2Q12035 217 aaPredicted RBP3.4□□□□□ -1.87
SCD6YPR129W YOL114CQ12322 202 aa3.4□□□□□ -1.87
SCD6YPR129W YOR012WQ12351 137 aa3.4□□□□□ -1.87
SCD6YPR129W RRD2Q12461 358 aa3.4□□□□□ -1.87
SCD6YPR129W MLP2P40457 1679 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-HO13535 1793 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-DR5P0C2I2 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-DR6P0C2I3 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-LR2P0C2I5 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-LR3P0C2I6 1755 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W TY1B-PR1P0C2I9 1755 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W TY1B-PR2P0C2J0 1756 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-PR3P0C2J1 1755 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W TY1B-JR1P47098 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-ML2Q03434 1755 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W TY1B-ER1Q03612 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-ML1Q04711 1755 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W TY1B-GR2Q12269 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-OLQ12273 1755 aa3.39□□□□□ -1.87
SCD6YPR129W TY1B-PLQ12414 1755 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W SPS2P08459 502 aa3.39□□□□□ -1.87
SCD6YPR129W YCR051WP25631 222 aa3.39□□□□□ -1.87
SCD6YPR129W UBC8P28263 218 aa3.39□□□□□ -1.87
SCD6YPR129W ARO7P32178 256 aa3.39□□□□□ -1.87
SCD6YPR129W MDH3P32419 343 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SCD6YPR129W HXT4P32467 576 aa3.39□□□□□ -1.87
SCD6YPR129W PTM1P32857 523 aa3.39□□□□□ -1.87
SCD6YPR129W SKT5P34226 696 aa3.39□□□□□ -1.87
SCD6YPR129W TCD2P36101 447 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W WSC4P38739 605 aa3.39□□□□□ -1.87
SCD6YPR129W RPF1P38805 295 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W CHL4P38907 458 aa3.39□□□□□ -1.87
SCD6YPR129W DHH1P39517 506 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W YND1P40009 630 aa3.39□□□□□ -1.87
SCD6YPR129W DSE1P40077 573 aa3.39□□□□□ -1.87
SCD6YPR129W FAU1P40099 211 aa3.39□□□□□ -1.87
SCD6YPR129W PFK26P40433 827 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W HXT9P40885 567 aa3.39□□□□□ -1.87
SCD6YPR129W GLC8P41818 229 aa3.39□□□□□ -1.87
SCD6YPR129W NSE4P43124 402 aa3.39□□□□□ -1.87
SCD6YPR129W YJR011CP47086 261 aaPredicted RBP3.39□□□□□ -1.87
SCD6YPR129W COS12P53053 380 aa3.39□□□□□ -1.87
SCD6YPR129W DIG1Q03063 452 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W SNO1Q03144 224 aa3.39□□□□□ -1.87
SCD6YPR129W DIG2Q03373 323 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W EKI1Q03764 534 aa3.39□□□□□ -1.87
SCD6YPR129W YML096WQ04489 525 aa3.39□□□□□ -1.87
SCD6YPR129W TVP18Q04767 167 aa3.39□□□□□ -1.87
SCD6YPR129W YDR278CQ05612 105 aa3.39□□□□□ -1.87
SCD6YPR129W RRP45Q05636 305 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W MRX9Q07349 420 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W IWR1Q07532 353 aaPredicted RBP3.39□□□□□ -1.87
SCD6YPR129W FMP45Q07651 309 aa3.39□□□□□ -1.87
SCD6YPR129W GRE1Q08969 168 aa3.39□□□□□ -1.87
SCD6YPR129W NMD4Q12129 218 aa3.39□□□□□ -1.87
SCD6YPR129W YLR046CQ12253 270 aa3.39□□□□□ -1.87
SCD6YPR129W TPT1Q12272 230 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W RMP1Q12530 201 aa3.39□□□□□ -1.87
SCD6YPR129W YIR021W-AQ3E739 70 aa3.39□□□□□ -1.87
SCD6YPR129W SLO1Q3E784 85 aa3.39□□□□□ -1.87
SCD6YPR129W TFB5Q3E7C1 72 aaPredicted RBP3.39□□□□□ -1.87
SCD6YPR129W DDP1Q99321 188 aaKnown RBP3.39□□□□□ -1.87
SCD6YPR129W ADH2P00331 348 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W RPL31AP0C2H8 113 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W RPL31BP0C2H9 113 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W YBR121C-AP0C5L4 52 aa3.38□□□□□ -1.87
SCD6YPR129W YFR010W-AP0C5N0 62 aa3.38□□□□□ -1.87
SCD6YPR129W DDI2P0CH63 225 aa3.38□□□□□ -1.87
SCD6YPR129W DDI3P0CH64 225 aa3.38□□□□□ -1.87
SCD6YPR129W RPS18AP0CX55 146 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W RPS18BP0CX56 146 aaPredicted RBP3.38□□□□□ -1.87
SCD6YPR129W NAM2P11325 894 aa3.38□□□□□ -1.87
SCD6YPR129W STE18P18852 110 aa3.38□□□□□ -1.87
SCD6YPR129W RPS1BP23248 255 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W MEK1P24719 497 aaPredicted RBP3.38□□□□□ -1.87
SCD6YPR129W ERG9P29704 444 aa3.38□□□□□ -1.87
SCD6YPR129W AEP1P32493 518 aa3.38□□□□□ -1.87
SCD6YPR129W RML2P32611 393 aa3.38□□□□□ -1.87
SCD6YPR129W UGX2P32772 223 aa3.38□□□□□ -1.87
SCD6YPR129W COS9P36034 407 aa3.38□□□□□ -1.87
SCD6YPR129W TCM62P38228 572 aaKnown RBP3.38□□□□□ -1.87
SCD6YPR129W ARN1P38731 627 aa3.38□□□□□ -1.87
SCD6YPR129W SMF1P38925 575 aa3.38□□□□□ -1.87
SCD6YPR129W PUG1P40100 303 aa3.38□□□□□ -1.87
SCD6YPR129W AIM22P47051 409 aa3.38□□□□□ -1.87
SCD6YPR129W NOP19P53317 196 aaPredicted RBP3.38□□□□□ -1.87
SCD6YPR129W YNL143CP53908 130 aa3.38□□□□□ -1.87
SCD6YPR129W SED5Q01590 340 aa3.38□□□□□ -1.87
SCD6YPR129W TRM44Q02648 567 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms