RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS2YOL047C YFR010W-AP0C5N0 62 aa3.34□□□□□ -1.87
LDS2YOL047C NHP6BP11633 99 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C UTR1P21373 530 aa3.34□□□□□ -1.87
LDS2YOL047C RPS1BP23248 255 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C YCL068CP25593 260 aa3.34□□□□□ -1.87
LDS2YOL047C YCR090CP25654 182 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C FUB1P25659 250 aa3.34□□□□□ -1.87
LDS2YOL047C BUB2P26448 306 aaPredicted RBP3.34□□□□□ -1.87
LDS2YOL047C LAC1P28496 418 aa3.34□□□□□ -1.87
LDS2YOL047C RNP1P32385 249 aa3.34□□□□□ -1.87
LDS2YOL047C RAD23P32628 398 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C RPS1AP33442 255 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C SOF1P33750 489 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C APL3P38065 1025 aa3.34□□□□□ -1.87
LDS2YOL047C YMC2P38087 329 aa3.34□□□□□ -1.87
LDS2YOL047C YBL028CP38202 106 aa3.34□□□□□ -1.87
LDS2YOL047C YHR177WP38867 453 aa3.34□□□□□ -1.87
LDS2YOL047C FMP52P40008 231 aa3.34□□□□□ -1.87
LDS2YOL047C SWM2P40342 146 aa3.34□□□□□ -1.87
LDS2YOL047C RFC2P40348 353 aa3.34□□□□□ -1.87
LDS2YOL047C FIS1P40515 155 aa3.34□□□□□ -1.87
LDS2YOL047C GDS1P41913 522 aa3.34□□□□□ -1.87
LDS2YOL047C GLR1P41921 483 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C PSA1P41940 361 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C GNA1P43577 159 aaPredicted RBP3.34□□□□□ -1.87
LDS2YOL047C YAE1P47118 141 aaPredicted RBP3.34□□□□□ -1.87
LDS2YOL047C GTO1P48239 356 aa3.34□□□□□ -1.87
LDS2YOL047C RIB4P50861 169 aaPredicted RBP3.34□□□□□ -1.87
LDS2YOL047C MPC1P53157 130 aaKnown RBP3.34□□□□□ -1.87
LDS2YOL047C GND2P53319 492 aa3.34□□□□□ -1.87
LDS2YOL047C BUD17P53727 317 aa3.34□□□□□ -1.87
LDS2YOL047C MNT4P53745 580 aa3.34□□□□□ -1.87
LDS2YOL047C YPL113CQ02961 396 aa3.34□□□□□ -1.87
LDS2YOL047C MSC1Q03104 513 aa3.34□□□□□ -1.87
LDS2YOL047C CAB5Q03941 241 aa3.34□□□□□ -1.87
LDS2YOL047C CSN9Q03981 162 aa3.34□□□□□ -1.87
LDS2YOL047C YLR173WQ06247 608 aa3.34□□□□□ -1.87
LDS2YOL047C RXT3Q07458 294 aa3.34□□□□□ -1.87
LDS2YOL047C YDL086WQ07505 273 aa3.34□□□□□ -1.87
LDS2YOL047C YPD1Q07688 167 aa3.34□□□□□ -1.87
LDS2YOL047C ZEO1Q08245 113 aa3.34□□□□□ -1.87
LDS2YOL047C GEP3Q08622 556 aa3.34□□□□□ -1.87
LDS2YOL047C IRC13Q08630 104 aa3.34□□□□□ -1.87
LDS2YOL047C LCB4Q12246 624 aa3.34□□□□□ -1.87
LDS2YOL047C YLR122CQ12312 125 aa3.34□□□□□ -1.87
LDS2YOL047C TRM13Q12383 476 aa3.34□□□□□ -1.87
LDS2YOL047C YKL018C-AQ3E7A7 99 aa3.34□□□□□ -1.87
LDS2YOL047C SUS1Q6WNK7 96 aa3.34□□□□□ -1.87
LDS2YOL047C YCL001W-BQ96VH2 84 aa3.34□□□□□ -1.87
LDS2YOL047C CDC21P06785 304 aa3.33□□□□□ -1.88
LDS2YOL047C CDC23P16522 626 aa3.33□□□□□ -1.88
LDS2YOL047C RPI1P23250 407 aaKnown RBP3.33□□□□□ -1.88
LDS2YOL047C MEK1P24719 497 aaPredicted RBP3.33□□□□□ -1.88
LDS2YOL047C POF1P25576 258 aa3.33□□□□□ -1.88
LDS2YOL047C YCR102CP25608 368 aa3.33□□□□□ -1.88
LDS2YOL047C CDC50P25656 391 aa3.33□□□□□ -1.88
LDS2YOL047C IDH1P28834 360 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
LDS2YOL047C ERG9P29704 444 aa3.33□□□□□ -1.88
LDS2YOL047C SNC1P31109 117 aa3.33□□□□□ -1.88
LDS2YOL047C ACB1P31787 87 aa3.33□□□□□ -1.88
LDS2YOL047C ECM25P32525 599 aa3.33□□□□□ -1.88
LDS2YOL047C SCM4P32564 187 aa3.33□□□□□ -1.88
LDS2YOL047C YKL162CP36052 402 aa3.33□□□□□ -1.88
LDS2YOL047C GMH1P36125 273 aa3.33□□□□□ -1.88
LDS2YOL047C RPL32P38061 130 aaKnown RBP3.33□□□□□ -1.88
LDS2YOL047C POP7P38291 140 aa3.33□□□□□ -1.88
LDS2YOL047C LAG1P38703 411 aa3.33□□□□□ -1.88
LDS2YOL047C ERV46P39727 415 aa3.33□□□□□ -1.88
LDS2YOL047C SPO73P40031 143 aa3.33□□□□□ -1.88
LDS2YOL047C LSM4P40070 187 aaKnown RBP3.33□□□□□ -1.88
LDS2YOL047C COG3P40094 801 aa3.33□□□□□ -1.88
LDS2YOL047C PRE6P40303 254 aaKnown RBP3.33□□□□□ -1.88
LDS2YOL047C PGD1P40356 397 aa3.33□□□□□ -1.88
LDS2YOL047C COA1P40452 197 aa3.33□□□□□ -1.88
LDS2YOL047C YIR035CP40579 254 aa3.33□□□□□ -1.88
LDS2YOL047C ERG10P41338 398 aaKnown RBP3.33□□□□□ -1.88
LDS2YOL047C BAP3P41815 604 aa3.33□□□□□ -1.88
LDS2YOL047C YGR201CP42936 225 aa3.33□□□□□ -1.88
LDS2YOL047C CHA4P43634 648 aa3.33□□□□□ -1.88
LDS2YOL047C MRX5P47007 382 aa3.33□□□□□ -1.88
LDS2YOL047C YJL118WP47022 219 aa3.33□□□□□ -1.88
LDS2YOL047C YJR141WP47172 347 aaPredicted RBP3.33□□□□□ -1.88
LDS2YOL047C JAC1P53193 184 aa3.33□□□□□ -1.88
LDS2YOL047C SWC4P53201 476 aa3.33□□□□□ -1.88
LDS2YOL047C GTR2P53290 341 aa3.33□□□□□ -1.88
LDS2YOL047C YNR062CP53748 327 aa3.33□□□□□ -1.88
LDS2YOL047C YMR034CQ05131 434 aaPredicted RBP3.33□□□□□ -1.88
LDS2YOL047C MRPL35Q06678 367 aa3.33□□□□□ -1.88
LDS2YOL047C CYK3Q07533 885 aa3.33□□□□□ -1.88
LDS2YOL047C MFG1Q07684 458 aa3.33□□□□□ -1.88
LDS2YOL047C AIM39Q08223 395 aa3.33□□□□□ -1.88
LDS2YOL047C THP1Q08231 455 aa3.33□□□□□ -1.88
LDS2YOL047C YOL131WQ08270 108 aa3.33□□□□□ -1.88
LDS2YOL047C RPS10AQ08745 105 aaPredicted RBP3.33□□□□□ -1.88
LDS2YOL047C RRG7Q08774 242 aaPredicted RBP3.33□□□□□ -1.88
LDS2YOL047C AKR2Q12013 749 aa3.33□□□□□ -1.88
LDS2YOL047C PAA1Q12447 191 aaKnown RBP3.33□□□□□ -1.88
LDS2YOL047C PSF1Q12488 208 aa3.33□□□□□ -1.88
LDS2YOL047C YPL247CQ12523 523 aa3.33□□□□□ -1.88
LDS2YOL047C YGL194C-AQ2V2P6 80 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms