RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SRN2	Q99176	213 aa		3.23	□□□□□ -1.89
TPM1	YNL079C	TAO3	P40468	2376 aa		3.23	□□□□□ -1.89
TPM1	YNL079C	RAD7	P06779	565 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	RHO1	P06780	209 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	CPR1	P14832	162 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	DAP2	P18962	818 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	FPR1	P20081	114 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	YSR3	P23501	404 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	CPR3	P25719	182 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	HIR2	P32480	875 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	CYS4	P32582	507 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	YKR015C	P36111	568 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YBR285W	P38354	144 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	INM1	P38710	295 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	MED6	P38782	295 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YHR127W	P38833	243 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	THO1	P40040	218 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	OSW5	P40219	148 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	SER33	P40510	469 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YJR011C	P47086	261 aa	Predicted RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	ECM27	P47144	725 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YIF1	P53845	314 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	SKO1	Q02100	647 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	GIP3	Q03016	1276 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	EMI1	Q04406	187 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	ERB1	Q04660	807 aa	Known RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	NSE1	Q07913	336 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YOL131W	Q08270	108 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	RSA1	Q08932	381 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	RKM1	Q08961	583 aa	Predicted RBP	3.22	□□□□□ -1.89
TPM1	YNL079C	VIK1	Q12045	647 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	HSP42	Q12329	375 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	MHF2	Q3E829	80 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YCL021W-A	Q96VH3	125 aa		3.22	□□□□□ -1.89
TPM1	YNL079C	YPR096C	O13587	100 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	YKR104W	P0CE69	306 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	UNG1	P12887	359 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	GAL3	P13045	520 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	KSS1	P14681	368 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	RPI1	P23250	407 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	SLM5	P25345	492 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	CTR86	P25355	563 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	RHB1	P25378	209 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	UBC8	P28263	218 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	NTG1	P31378	399 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	ZUO1	P32527	433 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	SEC17	P32602	292 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	TFB1	P32776	642 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	SPO23	P33757	523 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	VPS21	P36017	210 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	RIB1	P38066	345 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	YPT35	P38815	214 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	ATG7	P38862	630 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	MNN9	P39107	395 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	YEL073C	P39974	107 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	GIM4	P40005	111 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	YRB2	P40517	327 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	TOM22	P49334	152 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	ATP22	P50273	684 aa	Predicted RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	NBP35	P52920	328 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	BOR1	P53838	576 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	GOR1	P53839	350 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	SMP3	Q04174	516 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	YLR345W	Q06137	509 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	DTD1	Q07648	150 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	ATG10	Q07879	167 aa		3.21	□□□□□ -1.9
TPM1	YNL079C	WTM1	Q12363	437 aa	Known RBP	3.21	□□□□□ -1.9
TPM1	YNL079C	TIM9	O74700	87 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	RPS14A	P06367	137 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	DPB2	P24482	689 aa	Predicted RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	TRX3	P25372	127 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	RPS5	P26783	225 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	ERV1	P27882	189 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	NUP2	P32499	720 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	MGM101	P32787	269 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	CAT2	P32796	670 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	ECM4	P36156	370 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	TAE1	P38340	232 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	RCK1	P38622	512 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	GOS1	P38736	223 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	GGC1	P38988	300 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	RPS14B	P39516	138 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	MSS2	P40990	351 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	GCN20	P43535	752 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	CAK1	P43568	368 aa	Predicted RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	FAR7	P43592	221 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	BIR1	P47134	954 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	GPI8	P49018	411 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	IGO1	P53897	168 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	AQR1	P53943	586 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	SWP1	Q02795	286 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	MRP51	Q02950	344 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	YMR099C	Q03161	297 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	DBP9	Q06218	594 aa	Known RBP	3.2	□□□□□ -1.9
TPM1	YNL079C	ARR1	Q06596	294 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	YPL199C	Q08954	240 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	VPS68	Q12016	184 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	YPR022C	Q12139	1133 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	YDL199C	Q12407	687 aa		3.2	□□□□□ -1.9
TPM1	YNL079C	TPK3	P05986	398 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 84 ms