RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W SRP14P38985 146 aa2.85□□□□□ -1.95
UBP8YMR223W FRT2P39734 528 aa2.85□□□□□ -1.95
UBP8YMR223W ISC1P40015 477 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W LCP5P40079 357 aaPredicted RBP2.85□□□□□ -1.95
UBP8YMR223W JLP2P40206 208 aa2.85□□□□□ -1.95
UBP8YMR223W SOK1P40317 901 aa2.85□□□□□ -1.95
UBP8YMR223W YFR057WP43625 151 aa2.85□□□□□ -1.95
UBP8YMR223W HOC1P47124 396 aa2.85□□□□□ -1.95
UBP8YMR223W NAS6P50086 228 aa2.85□□□□□ -1.95
UBP8YMR223W NBP1P52919 319 aaPredicted RBP2.85□□□□□ -1.95
UBP8YMR223W GET1P53192 235 aa2.85□□□□□ -1.95
UBP8YMR223W YNL140CP53910 189 aa2.85□□□□□ -1.95
UBP8YMR223W CTF19Q02732 369 aa2.85□□□□□ -1.95
UBP8YMR223W HSP31Q04432 237 aa2.85□□□□□ -1.95
UBP8YMR223W NAT4Q04751 285 aa2.85□□□□□ -1.95
UBP8YMR223W ADH6Q04894 360 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W IMA2Q08295 589 aa2.85□□□□□ -1.95
UBP8YMR223W MUM3Q08750 479 aa2.85□□□□□ -1.95
UBP8YMR223W SAM4Q08985 325 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W YPQ1Q12010 308 aa2.85□□□□□ -1.95
UBP8YMR223W LSO2Q3E772 92 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W QCR2P07257 368 aa2.85□□□□□ -1.95
UBP8YMR223W MRPS5P33759 307 aa2.85□□□□□ -1.95
UBP8YMR223W NUF2P33895 451 aa2.85□□□□□ -1.95
UBP8YMR223W MYO3P36006 1272 aa2.85□□□□□ -1.95
UBP8YMR223W VPS21P36017 210 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W YER184CP39961 794 aa2.85□□□□□ -1.95
UBP8YMR223W GIM4P40005 111 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W YER079WP40052 210 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W NCA3P46955 337 aa2.85□□□□□ -1.95
UBP8YMR223W YJR011CP47086 261 aaPredicted RBP2.85□□□□□ -1.95
UBP8YMR223W AIM24P47127 394 aa2.85□□□□□ -1.95
UBP8YMR223W SEH1P53011 349 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W VEL1P53058 206 aa2.85□□□□□ -1.95
UBP8YMR223W LSG1P53145 640 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W UBX2Q04228 584 aa2.85□□□□□ -1.95
UBP8YMR223W PEX12Q04370 399 aa2.85□□□□□ -1.95
UBP8YMR223W KRE28Q04431 385 aa2.85□□□□□ -1.95
UBP8YMR223W SPC24Q04477 213 aa2.85□□□□□ -1.95
UBP8YMR223W DXO1Q06349 442 aa2.85□□□□□ -1.95
UBP8YMR223W ASR1Q06834 288 aa2.85□□□□□ -1.95
UBP8YMR223W PBP4Q07362 185 aaKnown RBP2.85□□□□□ -1.95
UBP8YMR223W PLB3Q08108 686 aa2.85□□□□□ -1.95
UBP8YMR223W ALE1Q08548 619 aa2.85□□□□□ -1.95
UBP8YMR223W DST1P07273 309 aa2.84□□□□□ -1.96
UBP8YMR223W MRP1P10662 321 aaKnown RBP2.84□□□□□ -1.96
UBP8YMR223W SAM2P19358 384 aaKnown RBP2.84□□□□□ -1.96
UBP8YMR223W IDH1P28834 360 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
UBP8YMR223W CDC13P32797 924 aaKnown RBP2.84□□□□□ -1.96
UBP8YMR223W HMT1P38074 348 aa2.84□□□□□ -1.96
UBP8YMR223W RIB5P38145 238 aa2.84□□□□□ -1.96
UBP8YMR223W PRS2P38620 318 aaKnown RBP2.84□□□□□ -1.96
UBP8YMR223W ATG7P38862 630 aa2.84□□□□□ -1.96
UBP8YMR223W MST28P39552 234 aa2.84□□□□□ -1.96
UBP8YMR223W YMR134WP40207 237 aa2.84□□□□□ -1.96
UBP8YMR223W PRM10P42946 383 aa2.84□□□□□ -1.96
UBP8YMR223W CWC25P53854 179 aaKnown RBP2.84□□□□□ -1.96
UBP8YMR223W SED5Q01590 340 aa2.84□□□□□ -1.96
UBP8YMR223W IRC4Q03036 179 aa2.84□□□□□ -1.96
UBP8YMR223W YDR248CQ03786 193 aa2.84□□□□□ -1.96
UBP8YMR223W SEC13Q04491 297 aaKnown RBP2.84□□□□□ -1.96
UBP8YMR223W PEX10Q05568 337 aa2.84□□□□□ -1.96
UBP8YMR223W ASA1Q06822 443 aa2.84□□□□□ -1.96
UBP8YMR223W YDL144CQ07589 356 aa2.84□□□□□ -1.96
UBP8YMR223W DDC1Q08949 612 aa2.84□□□□□ -1.96
UBP8YMR223W CSM4Q08955 156 aa2.84□□□□□ -1.96
UBP8YMR223W ERP3Q12403 225 aa2.84□□□□□ -1.96
UBP8YMR223W NOT5Q12514 560 aaPredicted RBP2.84□□□□□ -1.96
UBP8YMR223W RGS2Q99188 309 aa2.84□□□□□ -1.96
UBP8YMR223W YOR338WQ99326 363 aa2.84□□□□□ -1.96
UBP8YMR223W MON2P48563 1636 aaPredicted RBP2.84□□□□□ -1.96
UBP8YMR223W HIS4P00815 799 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W PUT1P09368 476 aa2.83□□□□□ -1.96
UBP8YMR223W RPS8AP0CX39 200 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W RPS8BP0CX40 200 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W NAM2P11325 894 aa2.83□□□□□ -1.96
UBP8YMR223W EHD3P28817 500 aa2.83□□□□□ -1.96
UBP8YMR223W SSO1P32867 290 aa2.83□□□□□ -1.96
UBP8YMR223W MRPL6P32904 214 aa2.83□□□□□ -1.96
UBP8YMR223W SRP102P36057 244 aaPredicted RBP2.83□□□□□ -1.96
UBP8YMR223W VAB2P40003 282 aa2.83□□□□□ -1.96
UBP8YMR223W LYS12P40495 371 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W TRS85P46944 698 aa2.83□□□□□ -1.96
UBP8YMR223W COX16P47081 118 aa2.83□□□□□ -1.96
UBP8YMR223W JHD2P47156 728 aaPredicted RBP2.83□□□□□ -1.96
UBP8YMR223W YJR149WP47177 404 aa2.83□□□□□ -1.96
UBP8YMR223W VMA10P48836 114 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W AZR1P50080 613 aa2.83□□□□□ -1.96
UBP8YMR223W YGL235WP53071 178 aa2.83□□□□□ -1.96
UBP8YMR223W MKC7P53379 596 aa2.83□□□□□ -1.96
UBP8YMR223W YIF1P53845 314 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W GIP3Q03016 1276 aa2.83□□□□□ -1.96
UBP8YMR223W SNO1Q03144 224 aa2.83□□□□□ -1.96
UBP8YMR223W BER1Q06688 274 aaKnown RBP2.83□□□□□ -1.96
UBP8YMR223W PER33Q12144 273 aa2.83□□□□□ -1.96
UBP8YMR223W PET20Q99373 253 aa2.83□□□□□ -1.96
UBP8YMR223W CPT1P17898 393 aa2.82□□□□□ -1.96
UBP8YMR223W RAD57P25301 460 aa2.82□□□□□ -1.96
UBP8YMR223W SLM5P25345 492 aaKnown RBP2.82□□□□□ -1.96
UBP8YMR223W CTR86P25355 563 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms