RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C HOM6P31116 359 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C NTG1P31378 399 aa2.08□□□□□ -2.08
SSD1YDR293C PAU2P32612 120 aa2.08□□□□□ -2.08
SSD1YDR293C TCA17P32613 152 aa2.08□□□□□ -2.08
SSD1YDR293C CDC13P32797 924 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C JEN1P36035 616 aa2.08□□□□□ -2.08
SSD1YDR293C DED81P38707 554 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C COG3P40094 801 aa2.08□□□□□ -2.08
SSD1YDR293C UTP25P40498 721 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C PKP1P40530 394 aa2.08□□□□□ -2.08
SSD1YDR293C COQ5P49017 307 aa2.08□□□□□ -2.08
SSD1YDR293C AMA1P50082 593 aa2.08□□□□□ -2.08
SSD1YDR293C TRM112P53738 135 aaPredicted RBP2.08□□□□□ -2.08
SSD1YDR293C FDC1Q03034 503 aa2.08□□□□□ -2.08
SSD1YDR293C YDR248CQ03786 193 aa2.08□□□□□ -2.08
SSD1YDR293C YLR036CQ07986 203 aa2.08□□□□□ -2.08
SSD1YDR293C COQ10Q08058 207 aa2.08□□□□□ -2.08
SSD1YDR293C FRE3Q08905 711 aa2.08□□□□□ -2.08
SSD1YDR293C YPL191CQ08930 360 aa2.08□□□□□ -2.08
SSD1YDR293C YDL211CQ12121 372 aa2.08□□□□□ -2.08
SSD1YDR293C SIR2P06700 562 aa2.07□□□□□ -2.08
SSD1YDR293C MATALPHA1P0CY06 175 aa2.07□□□□□ -2.08
SSD1YDR293C HMLALPHA1P0CY07 175 aa2.07□□□□□ -2.08
SSD1YDR293C SPT15P13393 240 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C PET9P18239 318 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C CPR4P25334 318 aa2.07□□□□□ -2.08
SSD1YDR293C DCG1P32460 244 aa2.07□□□□□ -2.08
SSD1YDR293C PET309P32522 965 aaPredicted RBP2.07□□□□□ -2.08
SSD1YDR293C THI2P38141 450 aa2.07□□□□□ -2.08
SSD1YDR293C INM1P38710 295 aa2.07□□□□□ -2.08
SSD1YDR293C RRF1P38771 230 aa2.07□□□□□ -2.08
SSD1YDR293C LNP1P38878 278 aa2.07□□□□□ -2.08
SSD1YDR293C ELO1P39540 310 aa2.07□□□□□ -2.08
SSD1YDR293C PRM5P40476 318 aa2.07□□□□□ -2.08
SSD1YDR293C BMT5P40493 336 aa2.07□□□□□ -2.08
SSD1YDR293C YJL218WP40892 196 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C PMT6P42934 759 aa2.07□□□□□ -2.08
SSD1YDR293C ECL1P48235 211 aa2.07□□□□□ -2.08
SSD1YDR293C PMT5P52867 743 aa2.07□□□□□ -2.08
SSD1YDR293C SEH1P53011 349 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C SCS3P53012 380 aa2.07□□□□□ -2.08
SSD1YDR293C VOA1P53262 265 aa2.07□□□□□ -2.08
SSD1YDR293C MAL12P53341 584 aa2.07□□□□□ -2.08
SSD1YDR293C RHO5P53879 331 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C RNH202Q05635 350 aa2.07□□□□□ -2.08
SSD1YDR293C BUR2Q05949 395 aa2.07□□□□□ -2.08
SSD1YDR293C FAR10Q06001 478 aa2.07□□□□□ -2.08
SSD1YDR293C RIF2Q06208 395 aa2.07□□□□□ -2.08
SSD1YDR293C BER1Q06688 274 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C YOR385WQ08909 290 aa2.07□□□□□ -2.08
SSD1YDR293C YPL245WQ12179 454 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C SNF8Q12483 233 aa2.07□□□□□ -2.08
SSD1YDR293C YHR213W-AQ8TGT4 77 aa2.07□□□□□ -2.08
SSD1YDR293C RPN13O13563 156 aa2.07□□□□□ -2.08
SSD1YDR293C YLR358CO13565 187 aa2.07□□□□□ -2.08
SSD1YDR293C TDH1P00360 332 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C AI1P03875 834 aa2.07□□□□□ -2.08
SSD1YDR293C SCEIP03882 235 aa2.07□□□□□ -2.08
SSD1YDR293C GAL4P04386 881 aa2.07□□□□□ -2.08
SSD1YDR293C MSW1P04803 379 aa2.07□□□□□ -2.08
SSD1YDR293C LEU4P06208 619 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C CDC21P06785 304 aa2.07□□□□□ -2.08
SSD1YDR293C GAL7P08431 366 aa2.07□□□□□ -2.08
SSD1YDR293C ERD2P18414 219 aa2.07□□□□□ -2.08
SSD1YDR293C YMC1P32331 307 aa2.07□□□□□ -2.08
SSD1YDR293C ERG1P32476 496 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C TMA19P35691 167 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C YHR097CP38809 366 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C GDI1P39958 451 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C SIT1P39980 628 aa2.07□□□□□ -2.08
SSD1YDR293C DPB11P47027 764 aaPredicted RBP2.07□□□□□ -2.08
SSD1YDR293C SGF73P53165 657 aa2.07□□□□□ -2.08
SSD1YDR293C POP6P53218 158 aa2.07□□□□□ -2.08
SSD1YDR293C DIG2Q03373 323 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C SIZ1Q04195 904 aa2.07□□□□□ -2.08
SSD1YDR293C MRPL1Q04599 285 aa2.07□□□□□ -2.08
SSD1YDR293C YOL159CQ08300 171 aa2.07□□□□□ -2.08
SSD1YDR293C YPL272CQ08984 517 aa2.07□□□□□ -2.08
SSD1YDR293C YDL176WQ12027 708 aa2.07□□□□□ -2.08
SSD1YDR293C AEP3Q12089 606 aa2.07□□□□□ -2.08
SSD1YDR293C YKL018C-AQ3E7A7 99 aa2.07□□□□□ -2.08
SSD1YDR293C SPO7P18410 259 aa2.07□□□□□ -2.08
SSD1YDR293C SAR1P20606 190 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C FUN19P28003 413 aaPredicted RBP2.07□□□□□ -2.08
SSD1YDR293C ACH1P32316 526 aa2.07□□□□□ -2.08
SSD1YDR293C MEI5P32489 222 aa2.07□□□□□ -2.08
SSD1YDR293C NRP1P32770 719 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SSD1YDR293C TAF14P35189 244 aa2.07□□□□□ -2.08
SSD1YDR293C YBR139WP38109 508 aa2.07□□□□□ -2.08
SSD1YDR293C LTP1P40347 161 aa2.07□□□□□ -2.08
SSD1YDR293C POG1P40473 351 aa2.07□□□□□ -2.08
SSD1YDR293C HXT14P42833 540 aa2.07□□□□□ -2.08
SSD1YDR293C AIM25P47140 327 aa2.07□□□□□ -2.08
SSD1YDR293C RAD17P48581 401 aa2.07□□□□□ -2.08
SSD1YDR293C DBP6P53734 629 aaKnown RBP2.07□□□□□ -2.08
SSD1YDR293C RHO4Q00246 291 aa2.07□□□□□ -2.08
SSD1YDR293C MET31Q03081 177 aa2.07□□□□□ -2.08
SSD1YDR293C SRL2Q12020 392 aa2.07□□□□□ -2.08
SSD1YDR293C YDL109CQ12103 647 aa2.07□□□□□ -2.08
SSD1YDR293C YOR114WQ12219 294 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms