RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SPATA31C2B4DYI2 1134 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 KCNJ18B7U540 433 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 N4BP3O15049 544 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 EDNRBP24530 442 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 CASP1P29466 404 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 GIT2Q14161 759 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 KCNJ12Q14500 433 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 GPNMBQ14956 572 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 TTI2Q6NXR4 508 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 CNKSR3Q6P9H4 555 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 PBXIP1Q96AQ6 731 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 DYDC2Q96IM9 177 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 POP1Q99575 1024 aaKnown RBP18.91■□□□□ 0.62
PHGDH-234ENST00000642041 NAA15Q9BXJ9 866 aaKnown RBP18.91■□□□□ 0.62
PHGDH-234ENST00000642041 BHMT2Q9H2M3 363 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
PHGDH-234ENST00000642041 GDAQ9Y2T3 454 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 PCDHB13Q9Y5F0 798 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 DCHS1Q96JQ0 3298 aa18.91■□□□□ 0.62
PHGDH-234ENST00000642041 ABHD14A-ACY1A0A1B0GW23 586 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 H0YCG3 227 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 CALUO43852 315 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-234ENST00000642041 FAM13AO94988 1023 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 MYBPC2Q14324 1141 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 ECM1Q16610 540 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 NFIL3Q16649 462 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 MIS18BP1Q6P0N0 1132 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 POTEGQ6S5H5 508 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 ERMP1Q7Z2K6 904 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 FILIP1Q7Z7B0 1213 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 RNF135Q8IUD6 432 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 BANK1Q8NDB2 785 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 CAGE1Q8TC20 777 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 AFAP1L1Q8TED9 768 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 PURBQ96QR8 312 aaKnown RBP18.9■□□□□ 0.62
PHGDH-234ENST00000642041 C17orf80Q9BSJ5 609 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 SRRTQ9BXP5 876 aaKnown RBP18.9■□□□□ 0.62
PHGDH-234ENST00000642041 PARVGQ9HBI0 331 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 SAMSN1Q9NSI8 373 aaKnown RBP18.9■□□□□ 0.62
PHGDH-234ENST00000642041 MYO7AQ13402 2215 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 FAM186AA6NE01 2351 aa18.9■□□□□ 0.62
PHGDH-234ENST00000642041 A0A087WWV3 80 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 TMEM221A6NGB7 291 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 M0R296 226 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 EML1O00423 815 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 PDXKO00764 312 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 PARNO95453 639 aaKnown RBP18.89■□□□□ 0.61
PHGDH-234ENST00000642041 ATP1A3P13637 1013 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 STX17P56962 302 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 SMAD2Q15796 467 aaKnown RBP18.89■□□□□ 0.61
PHGDH-234ENST00000642041 BMT2Q1RMZ1 405 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 FKBP15Q5T1M5 1219 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 RINT1Q6NUQ1 792 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 EP400NLQ6ZTU2 488 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 TMC6Q7Z403 805 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 KCNK18Q7Z418 384 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 CNGA4Q8IV77 575 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 SUGP1Q8IWZ8 645 aaKnown RBP18.89■□□□□ 0.61
PHGDH-234ENST00000642041 CCDC155Q8N6L0 562 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 MORC4Q8TE76 937 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 DRC1Q96MC2 740 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 LXNQ9BS40 222 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 IRF2BPLQ9H1B7 796 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 SLC39A2Q9NP94 309 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 KCND1Q9NSA2 647 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 NOD1Q9Y239 953 aa18.89■□□□□ 0.61
PHGDH-234ENST00000642041 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
PHGDH-234ENST00000642041 EFCAB14O75071 495 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 CXCL10P02778 98 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 TSR1Q2NL82 804 aaKnown RBP18.88■□□□□ 0.61
PHGDH-234ENST00000642041 BRDTQ58F21 947 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-234ENST00000642041 TCEAL5Q5H9L2 206 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 TRIM67Q6ZTA4 783 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 C1orf186Q6ZWK4 172 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 KIAA0895Q8NCT3 520 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 METTL14Q9HCE5 456 aaKnown RBP18.88■□□□□ 0.61
PHGDH-234ENST00000642041 JPH1Q9HDC5 661 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-234ENST00000642041 FAM86C1Q9NVL1 165 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 SLC9A2Q9UBY0 812 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 TRAF3IP3Q9Y228 551 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 INSL6Q9Y581 213 aa18.88■□□□□ 0.61
PHGDH-234ENST00000642041 MYO15AQ9UKN7 3530 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 KIF2AO00139 706 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-234ENST00000642041 CETN3O15182 167 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 CHMP2AO43633 222 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 NCK2O43639 380 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 KPNA6O60684 536 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 ZNF131P52739 623 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
PHGDH-234ENST00000642041 CYP4A11Q02928 519 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
PHGDH-234ENST00000642041 SMYD4Q8IYR2 804 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-234ENST00000642041 ZNF507Q8TCN5 953 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 PPP1R13LQ8WUF5 828 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 TMEM174Q8WUU8 243 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 HVCN1Q96D96 273 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 TMEM206Q9H813 350 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms