RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 EFCAB8A8MWE9 144 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 URI1O94763 535 aaPredicted RBP12.63□□□□□ -0.39
LINC00538-201ENST00000626109 RASGRP1O95267 797 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
LINC00538-201ENST00000626109 HOXD10P28358 340 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 CTGFP29279 349 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 RGS2P41220 211 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 BIRC3Q13489 604 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 NR1I3Q14994 352 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 MLC1Q15049 377 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 FBXO38Q6PIJ6 1188 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 TRIM65Q6PJ69 517 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 PPFIBP1Q86W92 1011 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 UBR7Q8N806 425 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 TBCKQ8TEA7 893 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 DHX58Q96C10 678 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
LINC00538-201ENST00000626109 PANX2Q96RD6 677 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 HERPUD2Q9BSE4 406 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 FAM167BQ9BTA0 163 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 PXMP2Q9NR77 195 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00538-201ENST00000626109 FBXO10Q9UK96 956 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 MKL2Q9ULH7 1088 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 PCDHGB3Q9Y5G1 929 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 V9GYY5 206 aaPredicted RBP12.63□□□□□ -0.39
LINC00538-201ENST00000626109 RPTORQ8N122 1335 aa12.63□□□□□ -0.39
LINC00538-201ENST00000626109 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 COBLO75128 1261 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 GNRH1P01148 92 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 NEFHP12036 1026 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 SREBF1P36956 1147 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ALDH5A1P51649 535 aaPredicted RBP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 CLDN10P78369 228 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 GRIN1Q05586 938 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 INF2Q27J81 1249 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 EARS2Q5JPH6 523 aaKnown RBP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 RSRC2Q7L4I2 434 aaKnown RBP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ANKMY2Q8IV38 441 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 IQUBQ8NA54 791 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 SPTLC1O15269 473 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 PGRP06401 933 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 UBXN2AP68543 259 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 DPYDQ12882 1025 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 NEK8Q86SG6 692 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 HNRNPLLQ8WVV9 542 aaKnown RBP12.62□□□□□ -0.39
LINC00538-201ENST00000626109 GIMAP1Q8WWP7 306 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ATP6V1E2Q96A05 226 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 PAGE5Q96GU1 130 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 PDCD2LQ9BRP1 358 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 MGAMO43451 1857 aa12.62□□□□□ -0.39
LINC00538-201ENST00000626109 ASB14A6NK59 587 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 TOR1BO14657 336 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 HOXC6P09630 235 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 SKIP12755 728 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 H2AFXP16104 143 aaPredicted RBP12.61□□□□□ -0.39
LINC00538-201ENST00000626109 CYP2B6P20813 491 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 CCND2P30279 289 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
LINC00538-201ENST00000626109 LAMC2Q13753 1193 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 PGM5Q15124 567 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 ARHGAP29Q52LW3 1261 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 TTC38Q5R3I4 469 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 SH3RF1Q7Z6J0 888 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 MILR1Q7Z6M3 343 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 KCT2Q8NC54 265 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 USP6NLQ92738 828 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
LINC00538-201ENST00000626109 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
LINC00538-201ENST00000626109 ZSWIM8A7E2V4 1837 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 VWA3AA6NCI4 1184 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ATP8B1O43520 1251 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 LGR5O75473 907 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ARIH2O95376 493 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 NR3C2P08235 984 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 HSPA1AP0DMV8 641 aaKnown RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 HSPA1BP0DMV9 641 aaKnown RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 USP11P51784 963 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 GNG11P61952 73 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 TUBB4BP68371 445 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ROR1Q01973 937 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 PRKCZQ05513 592 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 TUBB2AQ13885 445 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms