RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SOX10P56693 466 aa21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 GABPB1Q06547 395 aaPredicted RBP21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 XKR3Q5GH77 459 aa21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 MSL3Q8N5Y2 521 aaKnown RBP21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 ATP6V0A4Q9HBG4 840 aa21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 USP20Q9Y2K6 914 aa21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 ATG7O95352 703 aa21.39■■□□□ 1.02
PCDHB11-202ENST00000624887 ADRB2P07550 413 aa21.39■■□□□ 1.02
PCDHB11-202ENST00000624887 EPHX2P34913 555 aa21.39■■□□□ 1.02
PCDHB11-202ENST00000624887 KIF22Q14807 665 aa21.39■■□□□ 1.02
PCDHB11-202ENST00000624887 SNRNP35Q16560 246 aaKnown RBP21.39■■□□□ 1.02
PCDHB11-202ENST00000624887 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.02
PCDHB11-202ENST00000624887 MXI1P50539 228 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 ALDH5A1P51649 535 aaPredicted RBP21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 FSTL1Q12841 308 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 ARHGAP44Q17R89 818 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 CFAP221Q4G0U5 840 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 CCDC70Q6NSX1 233 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 DNAAF5Q86Y56 855 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 CBWD2Q8IUF1 395 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 ZC3H15Q8WU90 426 aaKnown RBP21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 TMEM117Q9H0C3 514 aa21.39■■□□□ 1.01
PCDHB11-202ENST00000624887 GOLGA8IPA6NC78 632 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 GOLGA8JA6NMD2 632 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 FOXN3O00409 490 aaPredicted RBP21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 NOP2P46087 812 aaKnown RBP21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 IREB2P48200 963 aaKnown RBP21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 CYFIP1Q7L576 1253 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 LRRC57Q8N9N7 239 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 PROCA1Q8NCQ7 364 aaPredicted RBP21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 FBXL18Q96ME1 805 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 UBE2TQ9NPD8 197 aaPredicted RBP21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 ST7Q9NRC1 585 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 MAFBQ9Y5Q3 323 aaPredicted RBP21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 ADGRA3Q8IWK6 1321 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
PCDHB11-202ENST00000624887 SORBS3O60504 671 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 PEX10O60683 326 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 SMC1AQ14683 1233 aaKnown RBP21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 SLC39A4Q6P5W5 647 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 RUBCNQ92622 972 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 SPATC1LQ9H0A9 340 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 EHD2Q9NZN4 543 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 A0A0G2JLL6 359 aaPredicted RBP21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 ABCD1P33897 745 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 PPATQ06203 517 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 MAP9Q49MG5 647 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 GADL1Q6ZQY3 521 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 PRRT2Q7Z6L0 340 aaPredicted RBP21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 ARHGEF19Q8IW93 802 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 TPCN2Q8NHX9 752 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 PARD3BQ8TEW8 1205 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 SAAL1Q96ER3 474 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 IFT74Q96LB3 600 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 SUGCTQ9HAC7 445 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 SMARCAL1Q9NZC9 954 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 ARHGAP28Q9P2N2 729 aa21.37■■□□□ 1.01
PCDHB11-202ENST00000624887 H0YCG3 227 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 CES2O00748 559 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 IRF6O14896 467 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 ATP4AP20648 1035 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 EDNRBP24530 442 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 GALCP54803 685 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 BRDTQ58F21 947 aaPredicted RBP21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 SEPT14Q6ZU15 432 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 LMBR1Q8WVP7 490 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 MS4A14Q96JA4 679 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 POLR3FQ9H1D9 316 aaPredicted RBP21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 ZNF302Q9NR11 478 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 KCNG1Q9UIX4 513 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 PACSIN2Q9UNF0 486 aaPredicted RBP21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 LRRN2O75325 713 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 MTERF2Q49AM1 385 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 SLFN11Q7Z7L1 901 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 TMC2Q8TDI7 906 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 ZNF526Q8TF50 670 aaPredicted RBP21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 MFSD14AQ96MC6 490 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 ELP3Q9H9T3 547 aa21.36■■□□□ 1.01
PCDHB11-202ENST00000624887 IGKV6D-21A0A0A0MT36 114 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 OATP04181 439 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 TMEM253P0C7T8 217 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 TNFAIP3P21580 790 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 GARTP22102 1010 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 ENPEPQ07075 957 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 CASP8Q14790 479 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 RPS6KA1Q15418 735 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 CCNI2Q6ZMN8 369 aaPredicted RBP21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 ERO1BQ86YB8 467 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 POMGNT1Q8WZA1 660 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 LRRC1Q9BTT6 524 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 COQ4Q9Y3A0 265 aa21.35■■□□□ 1.01
PCDHB11-202ENST00000624887 NCANO14594 1321 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 SOWAHBA6NEL2 793 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 CXCL11O14625 94 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 KIF4AO95239 1232 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 IRX3P78415 501 aaPredicted RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 EMC2Q15006 297 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 KRT39Q6A163 491 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 TAS1R3Q7RTX0 852 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms