RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CATSPER4Q7RTX7 472 aa8.78□□□□□ -1
CLK1-215ENST00000621181 GPR149Q86SP6 731 aa8.78□□□□□ -1
CLK1-215ENST00000621181 RHPN2Q8IUC4 686 aa8.78□□□□□ -1
CLK1-215ENST00000621181 CCDC148Q8NFR7 591 aa8.78□□□□□ -1
CLK1-215ENST00000621181 FEZF2Q8TBJ5 459 aa8.78□□□□□ -1
CLK1-215ENST00000621181 URGCPQ8TCY9 931 aa8.78□□□□□ -1
CLK1-215ENST00000621181 SLC22A17Q8WUG5 538 aa8.78□□□□□ -1
CLK1-215ENST00000621181 BCL7CQ8WUZ0 217 aaPredicted RBP8.78□□□□□ -1
CLK1-215ENST00000621181 SLC39A7Q92504 469 aa8.78□□□□□ -1
CLK1-215ENST00000621181 RTP3Q9BQQ7 232 aa8.78□□□□□ -1
CLK1-215ENST00000621181 SH2D3AQ9BRG2 576 aa8.78□□□□□ -1
CLK1-215ENST00000621181 TEKT3Q9BXF9 490 aa8.78□□□□□ -1
CLK1-215ENST00000621181 KCNK12Q9HB15 430 aa8.78□□□□□ -1
CLK1-215ENST00000621181 CHMP5Q9NZZ3 219 aa8.78□□□□□ -1
CLK1-215ENST00000621181 DNAJB4Q9UDY4 337 aa8.78□□□□□ -1
CLK1-215ENST00000621181 STK39Q9UEW8 545 aa8.78□□□□□ -1
CLK1-215ENST00000621181 DUSP12Q9UNI6 340 aa8.78□□□□□ -1
CLK1-215ENST00000621181 TMEM150BA6NC51 233 aa8.77□□□□□ -1
CLK1-215ENST00000621181 C2CD2LO14523 706 aa8.77□□□□□ -1
CLK1-215ENST00000621181 OFD1O75665 1012 aa8.77□□□□□ -1
CLK1-215ENST00000621181 SLC11A1P49279 550 aa8.77□□□□□ -1
CLK1-215ENST00000621181 CLCN4P51793 760 aa8.77□□□□□ -1
CLK1-215ENST00000621181 TARBP2Q15633 366 aaKnown RBP8.77□□□□□ -1
CLK1-215ENST00000621181 XKR3Q5GH77 459 aa8.77□□□□□ -1
CLK1-215ENST00000621181 C15orf39Q6ZRI6 1047 aa8.77□□□□□ -1
CLK1-215ENST00000621181 MIER3Q7Z3K6 550 aa8.77□□□□□ -1
CLK1-215ENST00000621181 ZNF410Q86VK4 478 aa8.77□□□□□ -1
CLK1-215ENST00000621181 CCDC105Q8IYK2 499 aa8.77□□□□□ -1
CLK1-215ENST00000621181 KCNG4Q8TDN1 519 aa8.77□□□□□ -1
CLK1-215ENST00000621181 PHKBQ93100 1093 aa8.77□□□□□ -1
CLK1-215ENST00000621181 GJA10Q969M2 543 aa8.77□□□□□ -1
CLK1-215ENST00000621181 PGBD4Q96DM1 585 aa8.77□□□□□ -1
CLK1-215ENST00000621181 FAM193BQ96PV7 902 aaPredicted RBP8.77□□□□□ -1
CLK1-215ENST00000621181 UNC45AQ9H3U1 944 aa8.77□□□□□ -1
CLK1-215ENST00000621181 MRPL17Q9NRX2 175 aaKnown RBP8.77□□□□□ -1
CLK1-215ENST00000621181 SUCLA2Q9P2R7 463 aaPredicted RBP8.77□□□□□ -1
CLK1-215ENST00000621181 DENND4AQ7Z401 1863 aa8.77□□□□□ -1
CLK1-215ENST00000621181 C2orf16Q68DN1 1984 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 PRPF3O43395 683 aaKnown RBP8.77□□□□□ -1.01
CLK1-215ENST00000621181 CNPP09543 421 aaKnown RBP8.77□□□□□ -1.01
CLK1-215ENST00000621181 NPR3P17342 541 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 USP11P51784 963 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 NONOQ15233 471 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLK1-215ENST00000621181 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 ZNF280BQ86YH2 543 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 DTWD2Q8NBA8 298 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 RDM1Q8NG50 284 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 BRF1Q92994 677 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 VN1R3Q9BXE9 311 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
CLK1-215ENST00000621181 IGSF9Q9P2J2 1179 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 PCDHB2Q9Y5E7 798 aa8.77□□□□□ -1.01
CLK1-215ENST00000621181 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 ZNF623O75123 536 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 ALDH2P05091 517 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 URODP06132 367 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 ADH1AP07327 375 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 CFHP08603 1231 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 GBP2P32456 591 aaPredicted RBP8.76□□□□□ -1.01
CLK1-215ENST00000621181 AK2P54819 239 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 KSR1Q8IVT5 923 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 STAMQ92783 540 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 SLC5A5Q92911 643 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 KLHL5Q96PQ7 755 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 JPH2Q9BR39 696 aaPredicted RBP8.76□□□□□ -1.01
CLK1-215ENST00000621181 RSAD1Q9HA92 442 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 MAN1C1Q9NR34 630 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 AGPAT5Q9NUQ2 364 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 VPS54Q9P1Q0 977 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 KANSL3Q9P2N6 904 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 FAN1Q9Y2M0 1017 aa8.76□□□□□ -1.01
CLK1-215ENST00000621181 IGKV6-21A0A0C4DH24 114 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 CCDC195A0A1B0GUA6 201 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 NARSO43776 548 aaKnown RBP8.75□□□□□ -1.01
CLK1-215ENST00000621181 B4GALT3O60512 393 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 PSMD10O75832 226 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 POMCP01189 267 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 C7P10643 843 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 CPA1P15085 419 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 NLRP5P59047 1200 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 AGMOQ6ZNB7 445 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 Q6ZUG5 572 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 TBCKQ8TEA7 893 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 HINFPQ9BQA5 517 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 SLC26A6Q9BXS9 759 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 RNF26Q9BY78 433 aaPredicted RBP8.75□□□□□ -1.01
CLK1-215ENST00000621181 WNT16Q9UBV4 365 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 DPP7Q9UHL4 492 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 ZNF292O60281 2723 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 NRP1O14786 923 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 N4BP1O75113 896 aaKnown RBP8.75□□□□□ -1.01
CLK1-215ENST00000621181 MAFO75444 373 aaPredicted RBP8.75□□□□□ -1.01
CLK1-215ENST00000621181 DDHD2O94830 711 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 GLUD1P00367 558 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 LMNAP02545 664 aaKnown RBP8.75□□□□□ -1.01
CLK1-215ENST00000621181 SOD2P04179 222 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 MYBP10242 640 aa8.75□□□□□ -1.01
CLK1-215ENST00000621181 AFF1P51825 1210 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms