RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CAND2O75155 1236 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 PPFIA2O75334 1257 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 HNRNPH1P31943 449 aaKnown RBP12.74□□□□□ -0.37
C11orf54-215ENST00000617482 VAMP7P51809 220 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 MESDQ14696 234 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 QPCTQ16769 361 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 AGBL2Q5U5Z8 902 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 MMS22LQ6ZRQ5 1243 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 STRA6Q9BX79 667 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 ZDHHC18Q9NUE0 388 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 MRPL11Q9Y3B7 192 aaKnown RBP12.74□□□□□ -0.37
C11orf54-215ENST00000617482 UBE4BO95155 1302 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
C11orf54-215ENST00000617482 ITGB5P18084 799 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 VCAM1P19320 739 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 MIGA2Q7L4E1 593 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 JAMLQ86YT9 394 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 FBXO25Q8TCJ0 367 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
C11orf54-215ENST00000617482 DDX20Q9UHI6 824 aaKnown RBP12.73□□□□□ -0.37
C11orf54-215ENST00000617482 TLDC2A0PJX2 215 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 TMEM150BA6NC51 233 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 SMIM23A6NLE4 172 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 SGPL1O95470 568 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 CHRNA5P30532 468 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 FNTAP49354 379 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 TRAF1Q13077 416 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 LLGL1Q15334 1064 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 BTBD6Q96KE9 485 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 PCDHB18PQ96TA0 734 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 TXLNGYQ9BZA5 131 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 EHMT1Q9H9B1 1298 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
C11orf54-215ENST00000617482 GOLGA8IPA6NC78 632 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 GOLGA8JA6NMD2 632 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 H0YIN7 160 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 COMTP21964 271 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 PMS2P54278 862 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 GPC5P78333 572 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 CETN1Q12798 172 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 B3GNT9Q6UX72 402 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 CPNE8Q86YQ8 564 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 UHMK1Q8TAS1 419 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 MXRA8Q9BRK3 442 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 EPB41L4BQ9H329 900 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 KCNH7Q9NS40 1196 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 LARSQ9P2J5 1176 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 PNMA2Q9UL42 364 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 YDJCA8MPS7 323 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 KIAA0391O15091 583 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 MUTP22033 750 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 SETQ01105 290 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 C1orf220Q5T0J3 134 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 UBAP2Q5T6F2 1119 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
C11orf54-215ENST00000617482 UBL4BQ8N7F7 174 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 PRELID2Q8N945 189 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 ELMO3Q96BJ8 720 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
C11orf54-215ENST00000617482 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 FAM187AA6NFU0 413 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 CYP26A1O43174 497 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 FSBPO95073 299 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-215ENST00000617482 DHX34Q14147 1143 aaKnown RBP12.71□□□□□ -0.37
C11orf54-215ENST00000617482 PPP2R5EQ16537 467 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 TTC27Q6P3X3 843 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 ZDHHC24Q6UX98 284 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.37
C11orf54-215ENST00000617482 SLC47A2Q86VL8 602 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 PPM1KQ8N3J5 372 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
C11orf54-215ENST00000617482 IL31RAQ8NI17 732 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-215ENST00000617482 ACCSQ96QU6 501 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 TMEM206Q9H813 350 aa12.71□□□□□ -0.37
C11orf54-215ENST00000617482 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms