RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 ZNHIT6Q9NWK9 470 aaKnown RBP22.48■■□□□ 1.19
CNTNAP3B-212ENST00000617422 GOLGA6L9A6NEM1 432 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 LRRIQ4A6NIV6 560 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 UCHL3P15374 230 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 SMPD1P17405 629 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 PPP3CAQ08209 521 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 C17orf99Q6UX52 265 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 GBP6Q6ZN66 633 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 LRRC71Q8N4P6 559 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 PRPF31Q8WWY3 499 aaKnown RBP22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 FLRT1Q9NZU1 646 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 TLL2Q9Y6L7 1015 aa22.47■■□□□ 1.19
CNTNAP3B-212ENST00000617422 GTPBP10A4D1E9 387 aaKnown RBP22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 HNRNPDLO14979 420 aaKnown RBP22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 LRRN2O75325 713 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 GH1P01241 217 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 NAMPTP43490 491 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 LAMC2Q13753 1193 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 BMS1Q14692 1282 aaKnown RBP22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 SMARCAD1Q9H4L7 1026 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 DNAI1Q9UI46 699 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 IGKV6-21A0A0C4DH24 114 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 LGALS2P05162 132 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 ERCC6LQ2NKX8 1250 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 ZNF771Q7L3S4 317 aaPredicted RBP22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 SUGCTQ9HAC7 445 aa22.46■■□□□ 1.19
CNTNAP3B-212ENST00000617422 EIF4A3P38919 411 aaKnown RBP22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 VAMP7P51809 220 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 CYP27A1Q02318 531 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ACVR2BQ13705 512 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 SNRNP35Q16560 246 aaKnown RBP22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 BRDTQ58F21 947 aaPredicted RBP22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 PRAMEF19Q5SWL8 479 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 INTS8Q75QN2 995 aaKnown RBP22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 HAPLN2Q9GZV7 340 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ZCCHC17Q9NP64 241 aaKnown RBP22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 TRIM10Q9UDY6 481 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 RCCD1A6NED2 376 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 TTLL13PA6NNM8 815 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 GJB1P08034 283 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ZNF286BP0CG31 522 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 PPTC7Q8NI37 304 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 KCNN1Q92952 543 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 EMID1Q96A84 441 aaPredicted RBP22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 FBXL18Q96ME1 805 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 TRPC6Q9Y210 931 aa22.45■■□□□ 1.18
CNTNAP3B-212ENST00000617422 EVPLQ92817 2033 aa22.44■■□□□ 1.18
CNTNAP3B-212ENST00000617422 LMO3Q8TAP4 145 aa22.44■■□□□ 1.18
CNTNAP3B-212ENST00000617422 DEPTORQ8TB45 409 aa22.44■■□□□ 1.18
CNTNAP3B-212ENST00000617422 POMGNT1Q8WZA1 660 aa22.44■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ABHD16BQ9H3Z7 469 aa22.44■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ARGLU1Q9NWB6 273 aaPredicted RBP22.44■■□□□ 1.18
CNTNAP3B-212ENST00000617422 MAPK13O15264 365 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 KRT13P13646 458 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 SLC26A2P50443 739 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 MCCD1P59942 119 aaPredicted RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 MAP2K5Q13163 448 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ASTE1Q2TB18 679 aaPredicted RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 CCDC170Q8IYT3 715 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 UBXN4Q92575 508 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 BICD1Q96G01 975 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 C16orf70Q9BSU1 422 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 DCAF8L1A6NGE4 600 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 EIF3CLB5ME19 914 aaKnown RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 KIF3CO14782 793 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 CTGFP29279 349 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 GCLMP48507 274 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 GNG11P61952 73 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 MYL7Q01449 175 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 RAPGEF1Q13905 1077 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 TERF2Q15554 542 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 CCL14Q16627 93 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 DUSP28Q4G0W2 176 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 SFMBT2Q5VUG0 894 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 IQCEQ6IPM2 695 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 USP6NLQ92738 828 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 SYN2Q92777 582 aaPredicted RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ZBTB45Q96K62 511 aaPredicted RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 POP1Q99575 1024 aaKnown RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 EIF3CQ99613 913 aaKnown RBP22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ERAP1Q9NZ08 941 aa22.43■■□□□ 1.18
CNTNAP3B-212ENST00000617422 PNMA6AP0CW24 399 aaPredicted RBP22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ARID5AQ03989 594 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 LAMTOR4Q0VGL1 99 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 CRHR2Q13324 411 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 MNS1Q8NEH6 495 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 FAM84AQ96KN4 292 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 CCDC42Q96M95 316 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ZNF446Q9NWS9 450 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 PPME1Q9Y570 386 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 H0YCG3 227 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 K7ERI5 159 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ADCY3O60266 1144 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 HBP1O60381 514 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 KIF11P52732 1056 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 JAM2P57087 298 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ARHGAP29Q52LW3 1261 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 TAF3Q5VWG9 929 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 IER5Q5VY09 327 aa22.42■■□□□ 1.18
CNTNAP3B-212ENST00000617422 ZNF668Q96K58 619 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms