RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 H3BQV1 296 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 TBX10O75333 385 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 CCT6AP40227 531 aaKnown RBP20.2■□□□□ 0.82
VCX3A-203ENST00000612369 PRPHP41219 470 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 NDUFV1P49821 464 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 MBTD1Q05BQ5 628 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 DLX2Q07687 328 aaPredicted RBP20.2■□□□□ 0.82
VCX3A-203ENST00000612369 NBR1Q14596 966 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 POTEGQ6S5H5 508 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 AGMOQ6ZNB7 445 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 RBM23Q86U06 439 aaKnown RBP20.2■□□□□ 0.82
VCX3A-203ENST00000612369 IGSF22Q8N9C0 903 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 URGCPQ8TCY9 931 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 TCF25Q9BQ70 676 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 RSAD1Q9HA92 442 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 ENTPD7Q9NQZ7 604 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 CD207Q9UJ71 328 aa20.2■□□□□ 0.82
VCX3A-203ENST00000612369 ARHGEF35A5YM69 484 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 LINC01565O15544 149 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 CYP11B2P19099 503 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 PBX3P40426 434 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 RNASELQ05823 741 aaKnown RBP20.19■□□□□ 0.82
VCX3A-203ENST00000612369 SMAD4Q13485 552 aaKnown RBP20.19■□□□□ 0.82
VCX3A-203ENST00000612369 BMS1Q14692 1282 aaKnown RBP20.19■□□□□ 0.82
VCX3A-203ENST00000612369 DUSP6Q16828 381 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 LONRF3Q496Y0 759 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 PADI6Q6TGC4 694 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 TMEM169Q96HH4 297 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 MSLNLQ96KJ4 702 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 CSRNP2Q9H175 543 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 NRDE2Q9H7Z3 1164 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.19■□□□□ 0.82
VCX3A-203ENST00000612369 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
VCX3A-203ENST00000612369 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 INPP5FQ9Y2H2 1132 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 PCDHGC5Q9Y5F6 944 aa20.19■□□□□ 0.82
VCX3A-203ENST00000612369 MEIS3P2A8K0S8 358 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 MBTPS2O43462 519 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 ZC3H11AO75152 810 aaKnown RBP eCLIP20.18■□□□□ 0.82
VCX3A-203ENST00000612369 EYA4O95677 639 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 ITGA4P13612 1032 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 COASYQ13057 564 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 SMAD2Q15796 467 aaKnown RBP20.18■□□□□ 0.82
VCX3A-203ENST00000612369 AMHR2Q16671 573 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 DTHD1Q6ZMT9 781 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 TMC7Q7Z402 723 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 HACE1Q8IYU2 909 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 GJD3Q8N144 294 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 C2orf40Q9H1Z8 148 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 CLEC1BQ9P126 229 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
VCX3A-203ENST00000612369 LRRIQ4A6NIV6 560 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 GALTP07902 379 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 SRGAP2BP0DMP2 458 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 ARF4P18085 180 aaPredicted RBP20.17■□□□□ 0.82
VCX3A-203ENST00000612369 SMC1AQ14683 1233 aaKnown RBP20.17■□□□□ 0.82
VCX3A-203ENST00000612369 PLPP4Q5VZY2 271 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 KRT79Q5XKE5 535 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 TMEM184AQ6ZMB5 413 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 MAEAQ7L5Y9 396 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 ZBTB8OSQ8IWT0 167 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 SMG8Q8ND04 991 aaKnown RBP20.17■□□□□ 0.82
VCX3A-203ENST00000612369 SNX29Q8TEQ0 813 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 TMEM175Q9BSA9 504 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 GPRC5CQ9NQ84 441 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 PRMT7Q9NVM4 692 aaPredicted RBP20.17■□□□□ 0.82
VCX3A-203ENST00000612369 IPPQ9Y573 584 aa20.17■□□□□ 0.82
VCX3A-203ENST00000612369 A0A1B0GUA9 196 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 NT5C1B-RDH14C9J2C7 533 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 PER2O15055 1255 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 INPPL1O15357 1258 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 GLP2RO95838 553 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 PPP2R5AQ15172 486 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 ECM1Q16610 540 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 FAM187BQ17R55 369 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 CDCA2Q69YH5 1023 aaPredicted RBP20.16■□□□□ 0.82
VCX3A-203ENST00000612369 SLC27A1Q6PCB7 646 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 MRPL43Q8N983 215 aaKnown RBP20.16■□□□□ 0.82
VCX3A-203ENST00000612369 IGSF21Q96ID5 467 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 CPB2Q96IY4 423 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 FAM193BQ96PV7 902 aaPredicted RBP20.16■□□□□ 0.82
VCX3A-203ENST00000612369 C1QTNF1Q9BXJ1 281 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 TRIM6Q9C030 488 aaPredicted RBP20.16■□□□□ 0.82
VCX3A-203ENST00000612369 FZD8Q9H461 694 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 KIAA1024Q9UPX6 916 aa20.16■□□□□ 0.82
VCX3A-203ENST00000612369 ALDH2P05091 517 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 NAMPTP43490 491 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 ATP2C1P98194 919 aaPredicted RBP20.15■□□□□ 0.82
VCX3A-203ENST00000612369 KCNC3Q14003 757 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 GIT2Q14161 759 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 CLUL1Q15846 466 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 LARP1BQ659C4 914 aaKnown RBP20.15■□□□□ 0.82
VCX3A-203ENST00000612369 DDX53Q86TM3 631 aaKnown RBP20.15■□□□□ 0.82
VCX3A-203ENST00000612369 ADHFE1Q8IWW8 467 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 KCTD17Q8N5Z5 321 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 SMRP1Q8NCR6 262 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 KIFAP3Q92845 792 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms