RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 PHF20Q9BVI0 1012 aa22.6■■□□□ 1.21
PPFIA3-204ENST00000602492 DHX33Q9H6R0 707 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-204ENST00000602492 PDRG1Q9NUG6 133 aa22.6■■□□□ 1.21
PPFIA3-204ENST00000602492 CNTNAP2Q9UHC6 1331 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 MARCH6O60337 910 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 SRGAP2CP0DJJ0 459 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 XBP1P17861 261 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 NUBP1P53384 320 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 KANK3Q6NY19 840 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 MRPL10Q7Z7H8 261 aaKnown RBP22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 ZNF280BQ86YH2 543 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 ZDHHC14Q8IZN3 488 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 FAM193BQ96PV7 902 aaPredicted RBP22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 NAP1L4Q99733 375 aaKnown RBP22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 LXNQ9BS40 222 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 VN1R3Q9BXE9 311 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 RSAD1Q9HA92 442 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 KANSL3Q9P2N6 904 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 WRAP73Q9P2S5 460 aaPredicted RBP22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 USTQ9Y2C2 406 aa22.59■■□□□ 1.21
PPFIA3-204ENST00000602492 SPDYE4A6NLX3 237 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 TBX3O15119 743 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 B4GALT3O60512 393 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 CCNT1O60563 726 aaKnown RBP22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 LAMTOR4Q0VGL1 99 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 EPHA7Q15375 998 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 TMC5Q6UXY8 1006 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 C4orf19Q8IY42 314 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 PLCD3Q8N3E9 789 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 TCP11Q8WWU5 503 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 TMEM175Q9BSA9 504 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 EMILIN2Q9BXX0 1053 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 MINDY3Q9H8M7 445 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 SFXN1Q9H9B4 322 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 BMP2KQ9NSY1 1161 aaPredicted RBP22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 FAM86C1Q9NVL1 165 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 LIMD1Q9UGP4 676 aa22.58■■□□□ 1.21
PPFIA3-204ENST00000602492 GAS2O43903 313 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 DDHD2O94830 711 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 ALDH2P05091 517 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 ASGR2P07307 311 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 YWHABP31946 246 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 EMC2Q15006 297 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 PIK3AP1Q6ZUJ8 805 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 OTUD6AQ7L8S5 288 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 HAS1Q92839 578 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 ATOH1Q92858 354 aaPredicted RBP22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 FAN1Q9Y2M0 1017 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 STK36Q9NRP7 1315 aa22.57■■□□□ 1.2
PPFIA3-204ENST00000602492 ASAP2O43150 1006 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 SSBP05455 408 aaKnown RBP eCLIP22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 KLRC2P26717 231 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 HOXA11P31270 313 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 SCRN1Q12765 414 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 UBXN11Q5T124 520 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 NCAPH2Q6IBW4 605 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 RNF149Q8NC42 400 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 KLHL5Q96PQ7 755 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 RGL1Q9NZL6 768 aa22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 PTPRZ1P23471 2315 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-204ENST00000602492 ERLIN2O94905 339 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 POMCP01189 267 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 AFF1P51825 1210 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 XKR9Q5GH70 373 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 GPR149Q86SP6 731 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 FERMT3Q86UX7 667 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 POTEDQ86YR6 584 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 CNNM3Q8NE01 707 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 OXER1Q8TDS5 423 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 ACSF2Q96CM8 615 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 DYDC2Q96IM9 177 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 SMOC2Q9H3U7 446 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 ZSWIM4Q9H7M6 989 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 UBN1Q9NPG3 1134 aa22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 MRPL17Q9NRX2 175 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 RIF1Q5UIP0 2472 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-204ENST00000602492 GALR2O43603 387 aaPredicted RBP22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 ST18O60284 1047 aa22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 CNPP09543 421 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 CLCN4P51793 760 aa22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 CCDC149Q6ZUS6 474 aa22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 SLFN12Q8IYM2 578 aa22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 MTRQ99707 1265 aa22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 GJB4Q9NTQ9 266 aa22.54■■□□□ 1.2
PPFIA3-204ENST00000602492 H0Y858 1186 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 NRP1O14786 923 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 GFRA3O60609 400 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 LILRB3O75022 631 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 BAG4O95429 457 aaKnown RBP22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 URODP06132 367 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 ITGA4P13612 1032 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 CYP4A11Q02928 519 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 CTTNQ14247 550 aaKnown RBP22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 PCBP1Q15365 356 aaKnown RBP eCLIP22.53■■□□□ 1.21e-7■■■■□ 23.7
PPFIA3-204ENST00000602492 OTOP3Q7RTS5 596 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 CCDC51Q96ER9 411 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 MFSD1Q9H3U5 465 aa22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 PRG3Q9Y2Y8 225 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-204ENST00000602492 CFAP54Q96N23 3096 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms