RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PCDHB2Q9Y5E7 798 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 ATP6V1DQ9Y5K8 247 aa22.15■■□□□ 1.14
SSBP4-210ENST00000601444 TBKBP1A7MCY6 615 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 SLC16A4O15374 487 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 PRKCBP05771 671 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 PLS3P13797 630 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 ANP32AP39687 249 aaKnown RBP22.14■■□□□ 1.13
SSBP4-210ENST00000601444 ERVK-21P61565 698 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 DMP1Q13316 513 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-210ENST00000601444 E2F4Q16254 413 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 FAM187BQ17R55 369 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 CLLU1OSQ5K130 101 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 RESP18Q5W5W9 173 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 NOTUMQ6P988 496 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 PPP4R3CPQ6ZMV5 832 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 DYMQ7RTS9 669 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 TAS1R3Q7RTX0 852 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 TGS1Q96RS0 853 aaKnown RBP22.14■■□□□ 1.13
SSBP4-210ENST00000601444 KMT5AQ9NQR1 393 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 PRMT7Q9NVM4 692 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-210ENST00000601444 HCSTQ9UBK5 93 aa22.14■■□□□ 1.13
SSBP4-210ENST00000601444 MRPL42Q9Y6G3 142 aaKnown RBP22.14■■□□□ 1.13
SSBP4-210ENST00000601444 A0A1B0GUA9 196 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 MYMKA6NI61 221 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 EOMESO95936 686 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 KRT18P05783 430 aaKnown RBP22.13■■□□□ 1.13
SSBP4-210ENST00000601444 AXLP30530 894 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 NCBP1Q09161 790 aaKnown RBP22.13■■□□□ 1.13
SSBP4-210ENST00000601444 ADGRE1Q14246 886 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 MAPK6Q16659 721 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 SV2BQ7L1I2 683 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 CMTR2Q8IYT2 770 aaKnown RBP22.13■■□□□ 1.13
SSBP4-210ENST00000601444 SMG8Q8ND04 991 aaKnown RBP22.13■■□□□ 1.13
SSBP4-210ENST00000601444 STAMQ92783 540 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 CASD1Q96PB1 797 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 NTPCRQ9BSD7 190 aaKnown RBP22.13■■□□□ 1.13
SSBP4-210ENST00000601444 C17orf75Q9HAS0 396 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 ARHGAP28Q9P2N2 729 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 ODF2LQ9ULJ1 636 aa22.13■■□□□ 1.13
SSBP4-210ENST00000601444 CNTNAP2Q9UHC6 1331 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 K7ERI5 159 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 ACKR2O00590 384 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 ZNF623O75123 536 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 EFNA5P52803 228 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 PRPF4BQ13523 1007 aaKnown RBP22.12■■□□□ 1.13
SSBP4-210ENST00000601444 TPRNQ4KMQ1 711 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 NT5DC1Q5TFE4 455 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 HELQQ8TDG4 1101 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 DDX12PQ92771 950 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 DHX58Q96C10 678 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 PRIMPOLQ96LW4 560 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 RNF39Q9H2S5 420 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 ZHX3Q9H4I2 956 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
SSBP4-210ENST00000601444 HES2Q9Y543 173 aa22.12■■□□□ 1.13
SSBP4-210ENST00000601444 POLR2DO15514 142 aaKnown RBP22.11■■□□□ 1.13
SSBP4-210ENST00000601444 FAM13AO94988 1023 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 RAB27AP51159 221 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 ZNF131P52739 623 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 EPC2Q52LR7 807 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 LRRC55Q6ZSA7 311 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 MRPL10Q7Z7H8 261 aaKnown RBP22.11■■□□□ 1.13
SSBP4-210ENST00000601444 TMEM192Q8IY95 271 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 MYCT1Q8N699 235 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 TMEM161BQ8NDZ6 487 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 SPIRE2Q8WWL2 714 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 PDZD7Q9H5P4 517 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 IPPQ9Y573 584 aa22.11■■□□□ 1.13
SSBP4-210ENST00000601444 NPTXRO95502 500 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 SKIP12755 728 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 EEF1DP3Q658K8 133 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 ADALQ6DHV7 355 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 AGMOQ6ZNB7 445 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 GDPD5Q8WTR4 605 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 CLP1Q92989 425 aaKnown RBP22.1■■□□□ 1.13
SSBP4-210ENST00000601444 DNAJC19Q96DA6 116 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 SCAND2PQ9GZW5 306 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-210ENST00000601444 TMEM117Q9H0C3 514 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 TMEM134Q9H6X4 195 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 PARVGQ9HBI0 331 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 TYW1Q9NV66 732 aaKnown RBP22.1■■□□□ 1.13
SSBP4-210ENST00000601444 FAM13BQ9NYF5 915 aa22.1■■□□□ 1.13
SSBP4-210ENST00000601444 LARSQ9P2J5 1176 aaKnown RBP22.1■■□□□ 1.13
SSBP4-210ENST00000601444 RBM19Q9Y4C8 960 aaKnown RBP22.1■■□□□ 1.13
SSBP4-210ENST00000601444 A0A1B0GVL5 298 aa22.09■■□□□ 1.13
SSBP4-210ENST00000601444 LPXNO60711 386 aa22.09■■□□□ 1.13
SSBP4-210ENST00000601444 AFF1P51825 1210 aaKnown RBP22.09■■□□□ 1.13
SSBP4-210ENST00000601444 TMEM132AQ24JP5 1023 aa22.09■■□□□ 1.13
SSBP4-210ENST00000601444 SLC27A1Q6PCB7 646 aa22.09■■□□□ 1.13
SSBP4-210ENST00000601444 CCDC51Q96ER9 411 aa22.09■■□□□ 1.13
SSBP4-210ENST00000601444 FIZ1Q96SL8 496 aa22.09■■□□□ 1.13
SSBP4-210ENST00000601444 NXF3Q9H4D5 531 aaKnown RBP22.09■■□□□ 1.13
SSBP4-210ENST00000601444 PHLPP2Q6ZVD8 1323 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 HOXA2O43364 376 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 TRAK2O60296 914 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 TBCAO75347 108 aaKnown RBP22.08■■□□□ 1.13
SSBP4-210ENST00000601444 OFD1O75665 1012 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 MAPTP10636 758 aaKnown RBP22.08■■□□□ 1.13
SSBP4-210ENST00000601444 CMA1P23946 247 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 CTNNB1P35222 781 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms