RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 USP38Q8NB14 1042 aa23.27■■□□□ 1.32
SCN1B-203ENST00000595652 IFIH1Q9BYX4 1025 aaKnown RBP23.27■■□□□ 1.32
SCN1B-203ENST00000595652 ST6GALNAC4Q9H4F1 302 aa23.27■■□□□ 1.32
SCN1B-203ENST00000595652 MAPK8IP1Q9UQF2 711 aa23.27■■□□□ 1.32
SCN1B-203ENST00000595652 PCDHB13Q9Y5F0 798 aa23.27■■□□□ 1.32
SCN1B-203ENST00000595652 SQORQ9Y6N5 450 aa23.27■■□□□ 1.32
SCN1B-203ENST00000595652 TTLL13PA6NNM8 815 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 TSPAN1O60635 241 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 PPP1R37O75864 691 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 ACRP10323 421 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 FPGSQ05932 587 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 KCNA1Q09470 495 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 PRPF4BQ13523 1007 aaKnown RBP23.26■■□□□ 1.31
SCN1B-203ENST00000595652 AMHR2Q16671 573 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 TCTN1Q2MV58 587 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 L1TD1Q5T7N2 865 aaKnown RBP23.26■■□□□ 1.31
SCN1B-203ENST00000595652 STXBP4Q6ZWJ1 553 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 EPM2AIP1Q7L775 607 aaPredicted RBP23.26■■□□□ 1.31
SCN1B-203ENST00000595652 NELFCDQ8IXH7 590 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 DBF4BQ8NFT6 615 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 BICD1Q96G01 975 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 ACCSQ96QU6 501 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 LBHD1Q9BQE6 289 aaPredicted RBP23.26■■□□□ 1.31
SCN1B-203ENST00000595652 STRA6Q9BX79 667 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 IKZF4Q9H2S9 585 aa23.26■■□□□ 1.31
SCN1B-203ENST00000595652 PIN4Q9Y237 131 aaKnown RBP23.26■■□□□ 1.31
SCN1B-203ENST00000595652 ACKR2O00590 384 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 CXCL10P02778 98 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 PPIGQ13427 754 aaKnown RBP eCLIP23.25■■□□□ 1.31
SCN1B-203ENST00000595652 ALCAMQ13740 583 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 MORC3Q14149 939 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 FAM187BQ17R55 369 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 PLEKHG4Q58EX7 1191 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 ZNF658Q5TYW1 1059 aaPredicted RBP23.25■■□□□ 1.31
SCN1B-203ENST00000595652 PPP4R3CPQ6ZMV5 832 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 CDR2LQ86X02 465 aaPredicted RBP23.25■■□□□ 1.31
SCN1B-203ENST00000595652 SCFD1Q8WVM8 642 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 SEPT8Q92599 483 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 TARS2Q9BW92 718 aaKnown RBP23.25■■□□□ 1.31
SCN1B-203ENST00000595652 MRPL4Q9BYD3 311 aaKnown RBP23.25■■□□□ 1.31
SCN1B-203ENST00000595652 IL23AQ9NPF7 189 aa23.25■■□□□ 1.31
SCN1B-203ENST00000595652 EIF3DO15371 548 aaKnown RBP eCLIP23.24■■□□□ 1.31
SCN1B-203ENST00000595652 ARF4P18085 180 aaPredicted RBP23.24■■□□□ 1.31
SCN1B-203ENST00000595652 BMP6P22004 513 aa23.24■■□□□ 1.31
SCN1B-203ENST00000595652 RBM43Q6ZSC3 357 aaKnown RBP23.24■■□□□ 1.31
SCN1B-203ENST00000595652 SYCP3Q8IZU3 236 aa23.24■■□□□ 1.31
SCN1B-203ENST00000595652 HVCN1Q96D96 273 aa23.24■■□□□ 1.31
SCN1B-203ENST00000595652 VWCEQ96DN2 955 aa23.24■■□□□ 1.31
SCN1B-203ENST00000595652 PRIMPOLQ96LW4 560 aa23.24■■□□□ 1.31
SCN1B-203ENST00000595652 TMX1Q9H3N1 280 aa23.24■■□□□ 1.31
SCN1B-203ENST00000595652 IBSPP21815 317 aaPredicted RBP23.23■■□□□ 1.31
SCN1B-203ENST00000595652 ABCD1P33897 745 aa23.23■■□□□ 1.31
SCN1B-203ENST00000595652 NCBP1Q09161 790 aaKnown RBP23.23■■□□□ 1.31
SCN1B-203ENST00000595652 MAP4K3Q8IVH8 894 aa23.23■■□□□ 1.31
SCN1B-203ENST00000595652 RPUSD2Q8IZ73 545 aaKnown RBP23.23■■□□□ 1.31
SCN1B-203ENST00000595652 MYOCDQ8IZQ8 938 aa23.23■■□□□ 1.31
SCN1B-203ENST00000595652 ZNF507Q8TCN5 953 aa23.23■■□□□ 1.31
SCN1B-203ENST00000595652 AGPAT5Q9NUQ2 364 aa23.23■■□□□ 1.31
SCN1B-203ENST00000595652 CNTNAP2Q9UHC6 1331 aa23.23■■□□□ 1.31
SCN1B-203ENST00000595652 MICAL3Q7RTP6 2002 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 MGEA5O60502 916 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 SCP2P22307 547 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 HOXA11P31270 313 aaPredicted RBP23.22■■□□□ 1.31
SCN1B-203ENST00000595652 HOXD13P35453 343 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 PRCPP42785 496 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 LIG4P49917 911 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 PCBP1Q15365 356 aaKnown RBP eCLIP23.22■■□□□ 1.31
SCN1B-203ENST00000595652 ATF7IP2Q5U623 682 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 EEF1DP3Q658K8 133 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 CNKSR3Q6P9H4 555 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 TRIML1Q8N9V2 468 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 ACO2Q99798 780 aaKnown RBP23.22■■□□□ 1.31
SCN1B-203ENST00000595652 EXOC7Q9UPT5 735 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 UBE4BO95155 1302 aa23.22■■□□□ 1.31
SCN1B-203ENST00000595652 TISP43B9A030 160 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 HNRNPDLO14979 420 aaKnown RBP23.21■■□□□ 1.31
SCN1B-203ENST00000595652 ZSCAN20P17040 1043 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-203ENST00000595652 MATR3P43243 847 aaKnown RBP eCLIP23.21■■□□□ 1.31
SCN1B-203ENST00000595652 MAGEA10P43363 369 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-203ENST00000595652 EPHB4P54760 987 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 SASS6Q6UVJ0 657 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 ZBTB33Q86T24 672 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 APBB2Q92870 758 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 KCNN1Q92952 543 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 ZBTB45Q96K62 511 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-203ENST00000595652 ADAM2Q99965 735 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 PDZD7Q9H5P4 517 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 ZMYM2Q9UBW7 1377 aa23.21■■□□□ 1.31
SCN1B-203ENST00000595652 ANKRD63C9JTQ0 380 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 H0YGN5 161 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 HARSP12081 509 aaKnown RBP23.2■■□□□ 1.3
SCN1B-203ENST00000595652 CD44P16070 742 aaKnown RBP23.2■■□□□ 1.3
SCN1B-203ENST00000595652 AXLP30530 894 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 NLRP12P59046 1061 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 DSC3Q14574 896 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 BMT2Q1RMZ1 405 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 TWF2Q6IBS0 349 aaKnown RBP23.2■■□□□ 1.3
SCN1B-203ENST00000595652 SLC39A4Q6P5W5 647 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 NOTUMQ6P988 496 aa23.2■■□□□ 1.3
SCN1B-203ENST00000595652 C16orf59Q7L2K0 433 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms