RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 PRIMPOLQ96LW4 560 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 TSPYL2Q9H2G4 693 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-214ENST00000590556 MRPL44Q9H9J2 332 aaKnown RBP21.08■□□□□ 0.97
DDX39A-214ENST00000590556 DACT1Q9NYF0 836 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 TBC1D7Q9P0N9 293 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 HOOK1Q9UJC3 728 aaKnown RBP21.08■□□□□ 0.97
DDX39A-214ENST00000590556 SLC4A7Q9Y6M7 1214 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 PVALEFA0A1B0GWK0 134 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 ACKR2O00590 384 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 AMHP03971 560 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 PRR29P0C7W0 189 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 MAPTP10636 758 aaKnown RBP21.07■□□□□ 0.96
DDX39A-214ENST00000590556 SCP2P22307 547 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 AXLP30530 894 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 HOXA11P31270 313 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-214ENST00000590556 STRN3Q13033 797 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 PRPF4BQ13523 1007 aaKnown RBP21.07■□□□□ 0.96
DDX39A-214ENST00000590556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.96
DDX39A-214ENST00000590556 LINC01599Q8WXQ3 324 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 FIZ1Q96SL8 496 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 OLFML3Q9NRN5 406 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 RGS18Q9NS28 235 aa21.07■□□□□ 0.96
DDX39A-214ENST00000590556 COLQQ9Y215 455 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-214ENST00000590556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-214ENST00000590556 B4GALT5O43286 388 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 ARF4P18085 180 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-214ENST00000590556 ABCD1P33897 745 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 DPYDQ12882 1025 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 POSTNQ15063 836 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 TMEM132AQ24JP5 1023 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 TWF2Q6IBS0 349 aaKnown RBP21.06■□□□□ 0.96
DDX39A-214ENST00000590556 NOTUMQ6P988 496 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 TAS1R3Q7RTX0 852 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 ZNF720Q7Z2F6 126 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 CPB2Q96IY4 423 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 C1orf112Q9NSG2 853 aa21.06■□□□□ 0.96
DDX39A-214ENST00000590556 CNTNAP2Q9UHC6 1331 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 RPN1P04843 607 aaKnown RBP21.05■□□□□ 0.96
DDX39A-214ENST00000590556 DEFB103AP81534 67 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 SLC24A5Q71RS6 500 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 MRPL4Q9BYD3 311 aaKnown RBP21.05■□□□□ 0.96
DDX39A-214ENST00000590556 ST6GALNAC4Q9H4F1 302 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 EXOC1Q9NV70 894 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 TBX20Q9UMR3 447 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 USP20Q9Y2K6 914 aa21.05■□□□□ 0.96
DDX39A-214ENST00000590556 KLRC4O43908 158 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 GCNT3O95395 438 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 EDN1P05305 212 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 ATP2A2P16615 1042 aaKnown RBP21.04■□□□□ 0.96
DDX39A-214ENST00000590556 IBSPP21815 317 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-214ENST00000590556 GTF2BQ00403 316 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 PNOCQ13519 176 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 ZC2HC1CQ53FD0 456 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-214ENST00000590556 NT5DC1Q5TFE4 455 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 ELOA2Q8IYF1 753 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-214ENST00000590556 MYOCDQ8IZQ8 938 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 KCNN1Q92952 543 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 HPS3Q969F9 1004 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 CCDC47Q96A33 483 aaKnown RBP21.04■□□□□ 0.96
DDX39A-214ENST00000590556 CCDC51Q96ER9 411 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 SLC9A7Q96T83 725 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 PCDHB13Q9Y5F0 798 aa21.04■□□□□ 0.96
DDX39A-214ENST00000590556 A0A1B0GUA9 196 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 A0A1W2PPC1 479 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 TTLL13PA6NNM8 815 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 C9IYK1 514 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 N4BP3O15049 544 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 SARSP49591 514 aaKnown RBP21.03■□□□□ 0.96
DDX39A-214ENST00000590556 EHHADHQ08426 723 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 ALCAMQ13740 583 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 KMT5BQ4FZB7 885 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 FAM26FQ5R3K3 315 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 PHOSPHO2Q8TCD6 241 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 TARS2Q9BW92 718 aaKnown RBP21.03■□□□□ 0.96
DDX39A-214ENST00000590556 TRAIPQ9BWF2 469 aa21.03■□□□□ 0.96
DDX39A-214ENST00000590556 TTC3P53804 2025 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 SMC2O95347 1197 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 MYBP10242 640 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 SKIP12755 728 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 MCM4P33991 863 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 FAM189BP81408 668 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 UBXN11Q5T124 520 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 ATF7IP2Q5U623 682 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 STXBP4Q6ZWJ1 553 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 CDR2LQ86X02 465 aaPredicted RBP21.02■□□□□ 0.96
DDX39A-214ENST00000590556 HVCN1Q96D96 273 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 BICD1Q96G01 975 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 ACO2Q99798 780 aaKnown RBP21.02■□□□□ 0.96
DDX39A-214ENST00000590556 STRA6Q9BX79 667 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 FGFBP2Q9BYJ0 223 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 PDZD7Q9H5P4 517 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 RNF216Q9NWF9 866 aaPredicted RBP21.02■□□□□ 0.96
DDX39A-214ENST00000590556 TNFSF13BQ9Y275 285 aa21.02■□□□□ 0.96
DDX39A-214ENST00000590556 A0A0U1RQF3 1178 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 PPP1R37O75864 691 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 UPP2O95045 317 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 STAG3L1P0CL83 205 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 RAB27AP51159 221 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 CASP5P51878 434 aa21.01■□□□□ 0.95
DDX39A-214ENST00000590556 PSMD2Q13200 908 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms