RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 GPSM3Q9Y4H4 160 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 TTC3P53804 2025 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 LAMA3Q16787 3333 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 A0A087WWV3 80 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 A0A087WZ62 844 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 DGAT1O75907 488 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 S1PR4O95977 384 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 STAG3L1P0CL83 205 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 SYT1P21579 422 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 MUTP22033 750 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 RARRES1P49788 294 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 HTRA4P83105 476 aaPredicted RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 KRT79Q5XKE5 535 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 RTN4RL1Q86UN2 441 aaPredicted RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 NPAS4Q8IUM7 802 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 ARMC2Q8NEN0 867 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 PRPF31Q8WWY3 499 aaKnown RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 LINC01599Q8WXQ3 324 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 ARNTL2Q8WYA1 636 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 FDXACB1Q9BRP7 624 aaPredicted RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 DBR1Q9UK59 544 aaKnown RBP11.53□□□□□ -0.56
SDF2-208ENST00000589788 COL4A3BPQ9Y5P4 624 aa11.53□□□□□ -0.56
SDF2-208ENST00000589788 LINC01553A4QN01 128 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 ARHGEF35A5YM69 484 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 ASAP2O43150 1006 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 MGEA5O60502 916 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.57
SDF2-208ENST00000589788 ARHGEF15O94989 841 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 BMP15O95972 392 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 SRGAP2CP0DJJ0 459 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 IGFBP4P22692 258 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 SFPQP23246 707 aaKnown RBP eCLIP11.52□□□□□ -0.57
SDF2-208ENST00000589788 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.57
SDF2-208ENST00000589788 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
SDF2-208ENST00000589788 LAMTOR4Q0VGL1 99 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 MXD4Q14582 209 aaPredicted RBP11.52□□□□□ -0.57
SDF2-208ENST00000589788 SLC24A5Q71RS6 500 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 IGSF22Q8N9C0 903 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 TGS1Q96RS0 853 aaKnown RBP11.52□□□□□ -0.57
SDF2-208ENST00000589788 RGS18Q9NS28 235 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
SDF2-208ENST00000589788 MTUS1Q9ULD2 1270 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.57
SDF2-208ENST00000589788 ADGRA3Q8IWK6 1321 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 VWA3AA6NCI4 1184 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 STX6O43752 255 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 CSDE1O75534 798 aaKnown RBP11.51□□□□□ -0.57
SDF2-208ENST00000589788 FGFR4P22455 802 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 PHKA2P46019 1235 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 TFDP1Q14186 410 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 BTG3Q14201 252 aaPredicted RBP11.51□□□□□ -0.57
SDF2-208ENST00000589788 ARL6IP4Q66PJ3 421 aaKnown RBP11.51□□□□□ -0.57
SDF2-208ENST00000589788 CATSPER4Q7RTX7 472 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 FIBCD1Q8N539 461 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 RNF149Q8NC42 400 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 MCPH1Q8NEM0 835 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 MAFAQ8NHW3 353 aaPredicted RBP11.51□□□□□ -0.57
SDF2-208ENST00000589788 XPNPEP1Q9NQW7 623 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 DDX19AQ9NUU7 478 aaKnown RBP11.51□□□□□ -0.57
SDF2-208ENST00000589788 DACT1Q9NYF0 836 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 KIAA1024Q9UPX6 916 aa11.51□□□□□ -0.57
SDF2-208ENST00000589788 PP2D1A8MPX8 630 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 C9IYK1 514 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 DGKIO75912 1065 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 RFX1P22670 979 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 CDC25AP30304 524 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 ERVK-21P61565 698 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 DSC3Q14574 896 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
SDF2-208ENST00000589788 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
SDF2-208ENST00000589788 IL17AQ16552 155 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 SRGAP1Q7Z6B7 1085 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 CDK5RAP3Q96JB5 506 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 SAMD11Q96NU1 681 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 POLR3FQ9H1D9 316 aaPredicted RBP11.5□□□□□ -0.57
SDF2-208ENST00000589788 DNM3Q9UQ16 869 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 MTMR6Q9Y217 621 aa11.5□□□□□ -0.57
SDF2-208ENST00000589788 COL4A6Q14031 1691 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 MYH15Q9Y2K3 1946 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 NLRC5Q86WI3 1866 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 RFXAPO00287 272 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 ERLIN2O94905 339 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 ARL2P36404 184 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 PTK2Q05397 1052 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 RESTQ13127 1097 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 FAM102BQ5T8I3 360 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 TWF2Q6IBS0 349 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 CMTR2Q8IYT2 770 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 ZNF689Q96CS4 500 aaPredicted RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 C17orf80Q9BSJ5 609 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms