RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 GBF1Q92538 1859 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 ABHD14A-ACY1A0A1B0GW23 586 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 NFIBO00712 420 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 TPD52L2O43399 206 aaKnown RBP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 GH1P01241 217 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 NEFLP07196 543 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 CD8BP10966 210 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 FUT4P22083 530 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 NT5C2P49902 561 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 RPS6P62753 249 aaKnown RBP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 TAGLNQ01995 201 aaKnown RBP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 ALX1Q15699 326 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 STXBP2Q15833 593 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 DGKDQ16760 1214 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 GPATCH4Q5T3I0 446 aaKnown RBP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 SEZ6L2Q6UXD5 910 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 MFSD6Q6ZSS7 791 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 DYMQ7RTS9 669 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 MCF2L2Q86YR7 1114 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 CILP2Q8IUL8 1156 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 C7orf31Q8N865 590 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 NSUN6Q8TEA1 469 aaKnown RBP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 STK32AQ8WU08 396 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 PMEPA1Q969W9 287 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 EVI5LQ96CN4 794 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 IWS1Q96ST2 819 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 SLC38A3Q99624 504 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 RAD9AQ99638 391 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 TMEM47Q9BQJ4 181 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 LRFN3Q9BTN0 628 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 ACSS3Q9H6R3 686 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 FAM105AQ9NUU6 356 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 ADAMTS6Q9UKP5 1117 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 FAM50BQ9Y247 325 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.48□□□□□ -1.37
DNMT1-220ENST00000589351 WDR19Q8NEZ3 1342 aa6.48□□□□□ -1.37
DNMT1-220ENST00000589351 CDH23Q9H251 3354 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 NMT2O60551 498 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 CTSBP07858 339 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 FGRP09769 529 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 ALADP13716 330 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 MX1P20591 662 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 NOVP48745 357 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 TRAF1Q13077 416 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 GRB10Q13322 594 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 TMEM63BQ5T3F8 832 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 TSHZ3Q63HK5 1081 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 DIEXFQ68CQ4 756 aaKnown RBP6.47□□□□□ -1.37
DNMT1-220ENST00000589351 TTBK2Q6IQ55 1244 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 KCNV1Q6PIU1 500 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 OGFOD3Q6PK18 319 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 SEPT14Q6ZU15 432 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 CHST3Q7LGC8 479 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 SESTD1Q86VW0 696 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 IQCA1Q86XH1 822 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 EDEM1Q92611 657 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 NECAB3Q96P71 396 aaPredicted RBP6.47□□□□□ -1.37
DNMT1-220ENST00000589351 TGS1Q96RS0 853 aaKnown RBP6.47□□□□□ -1.37
DNMT1-220ENST00000589351 EPHX3Q9H6B9 360 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 RAPGEFL1Q9UHV5 662 aa6.47□□□□□ -1.37
DNMT1-220ENST00000589351 MRPL11Q9Y3B7 192 aaKnown RBP6.47□□□□□ -1.37
DNMT1-220ENST00000589351 DDX49Q9Y6V7 483 aaKnown RBP6.47□□□□□ -1.37
DNMT1-220ENST00000589351 FRMPD2Q68DX3 1309 aaPredicted RBP6.47□□□□□ -1.37
DNMT1-220ENST00000589351 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 EREGO14944 169 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 DHX16O60231 1041 aaKnown RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 PPFIA4O75335 1185 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 EIF3JO75822 258 aaKnown RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 GJB5O95377 273 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 FGAP02671 866 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 AMHP03971 560 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 RPLP1P05386 114 aaKnown RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 PDHBP11177 359 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 EDNRBP24530 442 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 WDR5P61964 334 aaKnown RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 DNM1Q05193 864 aaKnown RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 ZNF543Q08ER8 600 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 PTPROQ16827 1216 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 USH1GQ495M9 461 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 C8orf34Q49A92 452 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 MCMDC2Q4G0Z9 681 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 ARHGEF16Q5VV41 709 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 LRRC8DQ7L1W4 858 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 DGKHQ86XP1 1220 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 TEX2Q8IWB9 1127 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 PI4K2BQ8TCG2 481 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 AFG1LQ8WV93 481 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 CLEC4DQ8WXI8 215 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 ESR2Q92731 530 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 COPS5Q92905 334 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 VWCEQ96DN2 955 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 MISP3Q96FF7 219 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 RMDN3Q96TC7 470 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 BHLHE41Q9C0J9 482 aaPredicted RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 KAT14Q9H8E8 782 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms