RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 RANBP2P49792 3224 aaKnown RBP17.09■□□□□ 0.33
GHDC-209ENST00000588762 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.09■□□□□ 0.33
GHDC-209ENST00000588762 K7ENM7 598 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 MGEA5O60502 916 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 MYL1P05976 194 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 NCKAP1LP55160 1127 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 DEFB103AP81534 67 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
GHDC-209ENST00000588762 TWF2Q6IBS0 349 aaKnown RBP17.09■□□□□ 0.33
GHDC-209ENST00000588762 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 HAUS6Q7Z4H7 955 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 ZBED2Q9BTP6 218 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
GHDC-209ENST00000588762 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 ACKR2O00590 384 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 KINO60870 393 aaKnown RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 STAG3L1P0CL83 205 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 MAPTP10636 758 aaKnown RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 SKIP12755 728 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 SARSP49591 514 aaKnown RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 AMHR2Q16671 573 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 ENGASEQ8NFI3 743 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 LINC01599Q8WXQ3 324 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 MRPL44Q9H9J2 332 aaKnown RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 HOOK1Q9UJC3 728 aaKnown RBP17.08■□□□□ 0.32
GHDC-209ENST00000588762 LRFN2Q9ULH4 789 aa17.08■□□□□ 0.32
GHDC-209ENST00000588762 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 PVALEFA0A1B0GWK0 134 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 C9IYK1 514 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 B4GALT5O43286 388 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 NR1I2O75469 434 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 UPP2O95045 317 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
GHDC-209ENST00000588762 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
GHDC-209ENST00000588762 CASP1P29466 404 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
GHDC-209ENST00000588762 RAB27AP51159 221 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
GHDC-209ENST00000588762 CUL4BQ13620 913 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 UNC13DQ70J99 1090 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 NPAS4Q8IUM7 802 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 HERC6Q8IVU3 1022 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 TOP1MTQ969P6 601 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
GHDC-209ENST00000588762 CPB2Q96IY4 423 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 TIGD1Q96MW7 591 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 MRPL4Q9BYD3 311 aaKnown RBP17.07■□□□□ 0.32
GHDC-209ENST00000588762 OLFML3Q9NRN5 406 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 TBC1D7Q9P0N9 293 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 PCDHB7Q9Y5E2 793 aa17.07■□□□□ 0.32
GHDC-209ENST00000588762 N4BP3O15049 544 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 NMT1P30419 496 aaKnown RBP17.06■□□□□ 0.32
GHDC-209ENST00000588762 FAM189BP81408 668 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 COASYQ13057 564 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 FAM117BQ6P1L5 589 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 APBB1IPQ7Z5R6 666 aaPredicted RBP17.06■□□□□ 0.32
GHDC-209ENST00000588762 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 TRAIPQ9BWF2 469 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 TRIM6Q9C030 488 aaPredicted RBP17.06■□□□□ 0.32
GHDC-209ENST00000588762 ST6GALNAC4Q9H4F1 302 aa17.06■□□□□ 0.32
GHDC-209ENST00000588762 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 A0A1B0GUA9 196 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 GCNT3O95395 438 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 ALCAMQ13740 583 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 POSTNQ15063 836 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 ATF7IP2Q5U623 682 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 TAS1R3Q7RTX0 852 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 ZNF720Q7Z2F6 126 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
GHDC-209ENST00000588762 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 KCNN1Q92952 543 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 HVCN1Q96D96 273 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 BICD1Q96G01 975 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 FIZ1Q96SL8 496 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
GHDC-209ENST00000588762 FAM105AQ9NUU6 356 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 TMEM161AQ9NX61 479 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 PCDHB13Q9Y5F0 798 aa17.05■□□□□ 0.32
GHDC-209ENST00000588762 FNDC1Q4ZHG4 1894 aaPredicted RBP17.04■□□□□ 0.32
GHDC-209ENST00000588762 GRXCR1A8MXD5 290 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 TLL1O43897 1013 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 GJB5O95377 273 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 EOMESO95936 686 aa17.04■□□□□ 0.32
GHDC-209ENST00000588762 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
GHDC-209ENST00000588762 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms