RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 AGMOQ6ZNB7 445 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
CACTIN-206ENST00000588749 DEPTORQ8TB45 409 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 RSPH1Q8WYR4 309 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 SYMPKQ92797 1274 aaKnown RBP16.03■□□□□ 0.16
CACTIN-206ENST00000588749 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 RSAD1Q9HA92 442 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 MTMR6Q9Y217 621 aa16.03■□□□□ 0.16
CACTIN-206ENST00000588749 CNTNAP2Q9UHC6 1331 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 ZC3H11AO75152 810 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 OFD1O75665 1012 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 SSBP05455 408 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 LIG1P18858 919 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 KCNA5P22460 613 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 PPM1AP35813 382 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 UBE3AQ05086 875 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 HYIQ5T013 277 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 FAM173BQ6P4H8 233 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 EP400NLQ6ZTU2 488 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 CABP7Q86V35 215 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 CDR2LQ86X02 465 aaPredicted RBP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 SMG8Q8ND04 991 aaKnown RBP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 CNNM3Q8NE01 707 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 IFT74Q96LB3 600 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 AK8Q96MA6 479 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 RUSC1Q9BVN2 902 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 TRIM6Q9C030 488 aaPredicted RBP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 NT5C3AQ9H0P0 336 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 C2orf40Q9H1Z8 148 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 TLR9Q9NR96 1032 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 PRMT7Q9NVM4 692 aaPredicted RBP16.02■□□□□ 0.16
CACTIN-206ENST00000588749 HES2Q9Y543 173 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 IPPQ9Y573 584 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 PCDHGC5Q9Y5F6 944 aa16.02■□□□□ 0.16
CACTIN-206ENST00000588749 XIRP2A4UGR9 3374 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 STX6O43752 255 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 PRKCBP05771 671 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 ITGA4P13612 1032 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 NCLP19338 710 aaKnown RBP16.01■□□□□ 0.15
CACTIN-206ENST00000588749 UBA7P41226 1012 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 BCAR1P56945 870 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 GRIN1Q05586 938 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 HYAL1Q12794 435 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 MAPK6Q16659 721 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 TMEM132AQ24JP5 1023 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 SLC39A11Q8N1S5 342 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 URGCPQ8TCY9 931 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 MICAL1Q8TDZ2 1067 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 ADAMTS19Q8TE59 1207 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 PABPC5Q96DU9 382 aaKnown RBP16.01■□□□□ 0.15
CACTIN-206ENST00000588749 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 APOL6Q9BWW8 343 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 FZD8Q9H461 694 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 CLDND1Q9NY35 253 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 SPG21Q9NZD8 308 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 CLIC4Q9Y696 253 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 BDP1A6H8Y1 2624 aa16.01■□□□□ 0.15
CACTIN-206ENST00000588749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 A0A1B0GUA9 196 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 NT5C1B-RDH14C9J2C7 533 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 HIP1RO75146 1068 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 NPTXRO95502 500 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.15
CACTIN-206ENST00000588749 ALDH7A1P49419 539 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 AFF1P51825 1210 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 ERVFC1P60507 584 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 PLCB3Q01970 1234 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 PRPF4BQ13523 1007 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 FAM187BQ17R55 369 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 TMEM119Q4V9L6 283 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 SLC27A1Q6PCB7 646 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 ADGRD2Q7Z7M1 963 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 DAW1Q8N136 415 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 MRPS27Q92552 414 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 CCDC113Q9H0I3 377 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 RNF39Q9H2S5 420 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 NXF3Q9H4D5 531 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 IGFLR1Q9H665 355 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 NRDE2Q9H7Z3 1164 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
CACTIN-206ENST00000588749 LZTS1Q9Y250 596 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 USP20Q9Y2K6 914 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 MYH11P35749 1972 aa16■□□□□ 0.15
CACTIN-206ENST00000588749 CCDC169A6NNP5 214 aa15.99■□□□□ 0.15
CACTIN-206ENST00000588749 H3BQ06 376 aaPredicted RBP15.99■□□□□ 0.15
CACTIN-206ENST00000588749 B4GALT3O60512 393 aa15.99■□□□□ 0.15
CACTIN-206ENST00000588749 POMCP01189 267 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms