RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 CNTNAP2Q9UHC6 1331 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 COL6A3P12111 3177 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 A0A1B0GUA9 196 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 CARNS1A5YM72 827 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 ACKR2O00590 384 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 PPP6R2O75170 966 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 PLCG1P19174 1290 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 TXLNAP40222 546 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 DMP1Q13316 513 aaPredicted RBP17.73■□□□□ 0.43
RETREG3-206ENST00000588423 KARSQ15046 597 aaKnown RBP17.73■□□□□ 0.43
RETREG3-206ENST00000588423 STK38Q15208 465 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 SLC27A1Q6PCB7 646 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 GLB1LQ6UWU2 654 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 LRRC55Q6ZSA7 311 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 HELQQ8TDG4 1101 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 EPSTI1Q96J88 318 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 BLOC1S4Q9NUP1 217 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 CCDC39Q9UFE4 941 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 PLAGL2Q9UPG8 496 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 PCDHB12Q9Y5F1 795 aa17.73■□□□□ 0.43
RETREG3-206ENST00000588423 B4GALT5O43286 388 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 OFD1O75665 1012 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 SSBP05455 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 PRKCBP05771 671 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 NPTX2P47972 431 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 PEX3P56589 373 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 PKP1Q13835 747 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 BECN1Q14457 450 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 SPOUT1Q5T280 376 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 AGMOQ6ZNB7 445 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 COLGALT1Q8NBJ5 622 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 LRRC15Q8TF66 581 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 LARP4BQ92615 738 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 RAD54LQ92698 747 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 CLIC6Q96NY7 704 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 NTPCRQ9BSD7 190 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 EIF2AQ9BY44 585 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 TMEM134Q9H6X4 195 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 ODF2LQ9ULJ1 636 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
RETREG3-206ENST00000588423 IPPQ9Y573 584 aa17.72■□□□□ 0.43
RETREG3-206ENST00000588423 TRANK1O15050 2925 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 MYH15Q9Y2K3 1946 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 N4BP3O15049 544 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 SPTLC2O15270 562 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 INPPL1O15357 1258 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 PLS3P13797 630 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 DDIT3P35638 169 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 UBE3AQ05086 875 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 PRPF4BQ13523 1007 aaKnown RBP17.71■□□□□ 0.43
RETREG3-206ENST00000588423 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-206ENST00000588423 TIGD5Q53EQ6 642 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 ARSHQ5FYA8 562 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 NOMO2Q5JPE7 1267 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 SPECC1Q5M775 1068 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 USP49Q70CQ1 688 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 HACE1Q8IYU2 909 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 KLHL23Q8NBE8 558 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 SPIRE2Q8WWL2 714 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 PPM1EQ8WY54 764 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 LPPQ93052 612 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-206ENST00000588423 RSAD1Q9HA92 442 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 POLD4Q9HCU8 107 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 ARHGAP28Q9P2N2 729 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 STK17AQ9UEE5 414 aa17.71■□□□□ 0.43
RETREG3-206ENST00000588423 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 ZMYM2Q9UBW7 1377 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 K7ERI5 159 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 GRM6O15303 877 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 BRD1O95696 1058 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 ITGB1P05556 798 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 ITGA4P13612 1032 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 PPM1AP35813 382 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 FOXD4L5Q5VV16 416 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-206ENST00000588423 GPBP1Q86WP2 473 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 SLC17A8Q8NDX2 589 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 SPPL3Q8TCT6 385 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 FOXD4L4Q8WXT5 416 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-206ENST00000588423 KCNN1Q92952 543 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 KIFC3Q9BVG8 833 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 KMT5AQ9NQR1 393 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 LARSQ9P2J5 1176 aaKnown RBP17.7■□□□□ 0.42
RETREG3-206ENST00000588423 KANSL3Q9P2N6 904 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 TFIP11Q9UBB9 837 aaKnown RBP17.7■□□□□ 0.42
RETREG3-206ENST00000588423 HCSTQ9UBK5 93 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 CFAP45Q9UL16 551 aa17.7■□□□□ 0.42
RETREG3-206ENST00000588423 CCDC169A6NNP5 214 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 SCP2P22307 547 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 SMTNP53814 917 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 PLCB3Q01970 1234 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 MCM6Q14566 821 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 RRAGBQ5VZM2 374 aa17.69■□□□□ 0.42
RETREG3-206ENST00000588423 KCNT2Q6UVM3 1135 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms