RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 OFD1O75665 1012 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 EYA4O95677 639 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 SSBP05455 408 aaKnown RBP eCLIP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 ITGA4P13612 1032 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 ARF4P18085 180 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 SYT1P21579 422 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 ALDH7A1P49419 539 aaKnown RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 KRT17Q04695 432 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 UBE3AQ05086 875 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 HYAL1Q12794 435 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 ARL6IP4Q66PJ3 421 aaKnown RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 AGMOQ6ZNB7 445 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 MRPL10Q7Z7H8 261 aaKnown RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 URGCPQ8TCY9 931 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 PABPC5Q96DU9 382 aaKnown RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 IFT74Q96LB3 600 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 MMTAG2Q9BU76 263 aaKnown RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 NFKBIZQ9BYH8 718 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 CSRNP2Q9H175 543 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 RSAD1Q9HA92 442 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 TLR9Q9NR96 1032 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 TBC1D13Q9NVG8 400 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 SPG21Q9NZD8 308 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 PPM1AP35813 382 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 BCAR1P56945 870 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 ERVFC1P60507 584 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 PPP2R5AQ15172 486 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 AMHR2Q16671 573 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 ADGRD2Q7Z7M1 963 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 SMG8Q8ND04 991 aaKnown RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 CNNM3Q8NE01 707 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 MRPS27Q92552 414 aaKnown RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 CCDC51Q96ER9 411 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 NECAB3Q96P71 396 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 FAM193BQ96PV7 902 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 C2orf40Q9H1Z8 148 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 PRMT7Q9NVM4 692 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-219ENST00000580540 HES2Q9Y543 173 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 IPPQ9Y573 584 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
SREBF1-219ENST00000580540 SPTBN5Q9NRC6 3674 aaKnown RBP18.38■□□□□ 0.53
SREBF1-219ENST00000580540 PLXNA4Q9HCM2 1894 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 NCK2O43639 380 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 NPTXRO95502 500 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 BMP15O95972 392 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
SREBF1-219ENST00000580540 CA8P35219 290 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 NRIP1P48552 1158 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 PLPP4Q5VZY2 271 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 KCNK18Q7Z418 384 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 CABP7Q86V35 215 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 PNMA5Q96PV4 448 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 KIFC3Q9BVG8 833 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 RUSC1Q9BVN2 902 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 NRDE2Q9H7Z3 1164 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 TLE6Q9H808 572 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 ENTPD7Q9NQZ7 604 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 CNTNAP2Q9UHC6 1331 aa18.38■□□□□ 0.53
SREBF1-219ENST00000580540 CCDC169A6NNP5 214 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 LINC01565O15544 149 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 POMCP01189 267 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 PRKCBP05771 671 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 UBA7P41226 1012 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 NAMPTP43490 491 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 AFF1P51825 1210 aaKnown RBP18.37■□□□□ 0.53
SREBF1-219ENST00000580540 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 CLUL1Q15846 466 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 MAPK6Q16659 721 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 LEXMQ3ZCV2 418 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 CDCA2Q69YH5 1023 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-219ENST00000580540 FAM173BQ6P4H8 233 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 TMC7Q7Z402 723 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 HSCBQ8IWL3 235 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 SLC39A11Q8N1S5 342 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 TMEM169Q96HH4 297 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 TCF25Q9BQ70 676 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 USP20Q9Y2K6 914 aa18.37■□□□□ 0.53
SREBF1-219ENST00000580540 A0A1B0GUA9 196 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 PER2O15055 1255 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 HIP1RO75146 1068 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
SREBF1-219ENST00000580540 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
SREBF1-219ENST00000580540 RAD51AP2Q09MP3 1159 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 PRPF4BQ13523 1007 aaKnown RBP18.36■□□□□ 0.53
SREBF1-219ENST00000580540 ATG2AQ2TAZ0 1938 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 RINT1Q6NUQ1 792 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 SLC27A1Q6PCB7 646 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 ZNF280BQ86YH2 543 aa18.36■□□□□ 0.53
SREBF1-219ENST00000580540 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-219ENST00000580540 RSPH1Q8WYR4 309 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms