RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 ZNF655Q8N720 491 aaPredicted RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 EXOC6Q8TAG9 804 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 RAET1EQ8TD07 263 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 DIS3LQ8TF46 1054 aaKnown RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.77□□□□□ -1.65
DDX42-211ENST00000580108 DACT3Q96B18 629 aaPredicted RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 FEZ1Q99689 392 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 CRNKL1Q9BZJ0 848 aaKnown RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 PRDM14Q9GZV8 571 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 DHX36Q9H2U1 1008 aaKnown RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 DCTPP1Q9H773 170 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 CRTAC1Q9NQ79 661 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 INCENPQ9NQS7 918 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 ECHDC1Q9NTX5 307 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 TMOD4Q9NZQ9 345 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 GMIPQ9P107 970 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 RBPJLQ9UBG7 517 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 HERC5Q9UII4 1024 aaKnown RBP4.77□□□□□ -1.65
DDX42-211ENST00000580108 SERPINB13Q9UIV8 391 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 SLC4A4Q9Y6R1 1079 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 PLXNA1Q9UIW2 1896 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 SMCHD1A6NHR9 2005 aa4.77□□□□□ -1.65
DDX42-211ENST00000580108 MCM3APO60318 1980 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 SALL3Q9BXA9 1300 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 TRIOBPQ9H2D6 2365 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 GSG1L2A8MUP6 293 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 RFXAPO00287 272 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 GREM1O60565 184 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 PRDM1O75626 825 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 ATE1O95260 518 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 ASNSP08243 561 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 VCAM1P19320 739 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 CDR1P51861 262 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 PCBP3P57721 371 aaKnown RBP4.76□□□□□ -1.65
DDX42-211ENST00000580108 KRTAP10-2P60368 255 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 HERVK_113P62684 666 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 YBX1P67809 324 aaKnown RBP4.76□□□□□ -1.65
DDX42-211ENST00000580108 TTF1Q15361 905 aaPredicted RBP4.76□□□□□ -1.65
DDX42-211ENST00000580108 SLC14A2Q15849 920 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 C12orf60Q5U649 245 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 CTR9Q6PD62 1173 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 SPICE1Q8N0Z3 855 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 SIGLEC10Q96LC7 697 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 STRBPQ96SI9 672 aaKnown RBP4.76□□□□□ -1.65
DDX42-211ENST00000580108 NUP88Q99567 741 aaPredicted RBP4.76□□□□□ -1.65
DDX42-211ENST00000580108 XYLT2Q9H1B5 865 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 RPAP3Q9H6T3 665 aaPredicted RBP4.76□□□□□ -1.65
DDX42-211ENST00000580108 AS3MTQ9HBK9 375 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 FBXO28Q9NVF7 368 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 BTBD7Q9P203 1132 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 GJD2Q9UKL4 321 aa4.76□□□□□ -1.65
DDX42-211ENST00000580108 FADS2P1A8MWK0 482 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 N4BP3O15049 544 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 FOXP2O15409 715 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 RNF113AO15541 343 aaKnown RBP4.75□□□□□ -1.65
DDX42-211ENST00000580108 GPAA1O43292 621 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 SIGLEC6O43699 453 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 FOXD2O60548 495 aaPredicted RBP4.75□□□□□ -1.65
DDX42-211ENST00000580108 IGHDP01880 384 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 EEF2P13639 858 aaKnown RBP4.75□□□□□ -1.65
DDX42-211ENST00000580108 PNLIPP16233 465 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 RTP1P59025 263 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 CHMP4BP1P59074 171 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 ERVFRD-1P60508 538 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 FAM110CQ1W6H9 321 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 ANKRD45Q5TZF3 282 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 VPS53Q5VIR6 699 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 WDR78Q5VTH9 848 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 CDCP2Q5VXM1 449 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 CATSPERGQ6ZRH7 1159 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 TMEFF1Q8IYR6 380 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 KBTBD3Q8NAB2 608 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 TRIB2Q92519 343 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 ATG4CQ96DT6 458 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 DEFB118Q96PH6 123 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 FSD1Q9BTV5 496 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 TANGO6Q9C0B7 1094 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 LNPKQ9C0E8 428 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 KIAA1683Q9H0B3 1180 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.75□□□□□ -1.65
DDX42-211ENST00000580108 CNNM2Q9H8M5 875 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 RTEL1Q9NZ71 1219 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 FLRT1Q9NZU1 646 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 MORF4L1Q9UBU8 362 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 GPR55Q9Y2T6 319 aaPredicted RBP4.75□□□□□ -1.65
DDX42-211ENST00000580108 SLC45A1Q9Y2W3 748 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 IRAK3Q9Y616 596 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 CENPFP49454 3210 aa4.75□□□□□ -1.65
DDX42-211ENST00000580108 LCTP09848 1927 aa4.74□□□□□ -1.65
DDX42-211ENST00000580108 A0A0D9SFI3 127 aa4.74□□□□□ -1.65
DDX42-211ENST00000580108 OTOL1A6NHN0 477 aaPredicted RBP4.74□□□□□ -1.65
DDX42-211ENST00000580108 C19orf81C9J6K1 198 aa4.74□□□□□ -1.65
DDX42-211ENST00000580108 H0YGN5 161 aa4.74□□□□□ -1.65
DDX42-211ENST00000580108 MX1P20591 662 aa4.74□□□□□ -1.65
DDX42-211ENST00000580108 HOXD10P28358 340 aa4.74□□□□□ -1.65
DDX42-211ENST00000580108 CCND3P30281 292 aaPredicted RBP4.74□□□□□ -1.65
DDX42-211ENST00000580108 HOXA7P31268 230 aaPredicted RBP4.74□□□□□ -1.65
DDX42-211ENST00000580108 EIF4A3P38919 411 aaKnown RBP4.74□□□□□ -1.65
DDX42-211ENST00000580108 CTSKP43235 329 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms