RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 OTOP1Q7RTM1 612 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 CDR2LQ86X02 465 aaPredicted RBP14.71□□□□□ -0.06
NDEL1-204ENST00000578172 FNBP1Q96RU3 617 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 AGPAT1Q99943 283 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 RAB17Q9H0T7 212 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 EHMT1Q9H9B1 1298 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 KCNH7Q9NS40 1196 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 NYAP2Q9P242 653 aa14.71□□□□□ -0.06
NDEL1-204ENST00000578172 CNOT8Q9UFF9 292 aaKnown RBP14.71□□□□□ -0.06
NDEL1-204ENST00000578172 MRPL11Q9Y3B7 192 aaKnown RBP14.71□□□□□ -0.06
NDEL1-204ENST00000578172 ACOT2P49753 483 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 CLK2P49760 499 aaKnown RBP14.7□□□□□ -0.06
NDEL1-204ENST00000578172 TBC1D1Q86TI0 1168 aaPredicted RBP14.7□□□□□ -0.06
NDEL1-204ENST00000578172 NT5DC3Q86UY8 548 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 ISCUQ9H1K1 167 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 SLC24A3Q9HC58 644 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 GDF3Q9NR23 364 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 SEPT9Q9UHD8 586 aaPredicted RBP14.7□□□□□ -0.06
NDEL1-204ENST00000578172 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
NDEL1-204ENST00000578172 PCDHA2Q9Y5H9 948 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 POC1B-GALNT4F8VUJ3 575 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 SREBF1P36956 1147 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 CRY2Q49AN0 593 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 SGO2Q562F6 1265 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 ARHGEF16Q5VV41 709 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 SPOPLQ6IQ16 392 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 CYFIP2Q96F07 1278 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 C11orf70Q9BRQ4 267 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 RNF14Q9UBS8 474 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 GMNCA6NCL1 334 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 LRRIQ4A6NIV6 560 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 CTNNA2P26232 953 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 PPP2R2AP63151 447 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 HIBCHQ6NVY1 386 aaPredicted RBP14.7□□□□□ -0.06
NDEL1-204ENST00000578172 JAMLQ86YT9 394 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 IQCKQ8N0W5 287 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 PRMT1Q99873 361 aaKnown RBP14.7□□□□□ -0.06
NDEL1-204ENST00000578172 EPN3Q9H201 632 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 MTUS1Q9ULD2 1270 aa14.7□□□□□ -0.06
NDEL1-204ENST00000578172 DENND3A2RUS2 1198 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 CHN1P15882 459 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 PRLRP16471 622 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 SMARCA1P28370 1054 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 MTMR1Q13613 665 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 HHIPL2Q6UWX4 724 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 SCARA5Q6ZMJ2 495 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 ZNF720Q7Z2F6 126 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 NEK9Q8TD19 979 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 C9orf72Q96LT7 481 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 EDEM3Q9BZQ6 932 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 HSPBP1Q9NZL4 362 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 HMGB1P1B2RPK0 211 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-204ENST00000578172 HSPA1LP34931 641 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 PMS2P54278 862 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 GKAP1Q5VSY0 366 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-204ENST00000578172 RAPGEF5Q92565 580 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 STK33Q9BYT3 514 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 TAOK3Q9H2K8 898 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 WDR91A4D1P6 747 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 GAP43P17677 238 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 HNRNPH1P31943 449 aaKnown RBP14.69□□□□□ -0.06
NDEL1-204ENST00000578172 ZNF564Q8TBZ8 553 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-204ENST00000578172 TATDN2Q93075 761 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 LENG9Q96B70 501 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 TAAR1Q96RJ0 339 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 CTNNAL1Q9UBT7 734 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 TRPC5Q9UL62 973 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-204ENST00000578172 COG5Q9UP83 839 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 SMCHD1A6NHR9 2005 aa14.69□□□□□ -0.06
NDEL1-204ENST00000578172 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 MAPK4P31152 587 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PSMC4P43686 418 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 MMS22LQ6ZRQ5 1243 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PSMD1Q99460 953 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 DDX23Q9BUQ8 820 aaKnown RBP14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PDGFDQ9GZP0 370 aaPredicted RBP14.68□□□□□ -0.06
NDEL1-204ENST00000578172 GRIN2DO15399 1336 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 MEFVO15553 781 aaPredicted RBP14.68□□□□□ -0.06
NDEL1-204ENST00000578172 YY1P25490 414 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PDE6CP51160 858 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PPATQ06203 517 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 ZBTB33Q86T24 672 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 XXYLT1Q8NBI6 393 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 KMT5AQ9NQR1 393 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 SAMD15Q9P1V8 674 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 ZHX2Q9Y6X8 837 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PITPNM2Q9BZ72 1349 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 IRS2Q9Y4H2 1338 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 ANKRD62A6NC57 917 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 PYGMP11217 842 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 MCTP2Q6DN12 878 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 ZDHHC15Q96MV8 337 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 TRAF3IP3Q9Y228 551 aa14.68□□□□□ -0.06
NDEL1-204ENST00000578172 MARK3P27448 753 aa14.67□□□□□ -0.06
NDEL1-204ENST00000578172 SPIRE1Q08AE8 756 aa14.67□□□□□ -0.06
NDEL1-204ENST00000578172 ORC2Q13416 577 aaPredicted RBP14.67□□□□□ -0.06
NDEL1-204ENST00000578172 CUL1Q13616 776 aa14.67□□□□□ -0.06
NDEL1-204ENST00000578172 KIF2BQ8N4N8 673 aa14.67□□□□□ -0.06
NDEL1-204ENST00000578172 TAS1R2Q8TE23 839 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms