RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 NCLP19338 710 aaKnown RBP29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 LONP1P36776 959 aaKnown RBP29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 UBA7P41226 1012 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 MRPS5P82675 430 aaKnown RBP29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 TFF2Q03403 129 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 CSPP1Q1MSJ5 1256 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 TMEM119Q4V9L6 283 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 KCNT2Q6UVM3 1135 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 PPP4R3CPQ6ZMV5 832 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 C1orf186Q6ZWK4 172 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 THNSL1Q8IYQ7 743 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 SMG8Q8ND04 991 aaKnown RBP29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 RSPH1Q8WYR4 309 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 HLA-CQ95604 372 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 INPP5FQ9Y2H2 1132 aa29.18■■■□□ 2.26
PPP4R1-204ENST00000577393 SLC26A4O43511 780 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 FGF18O76093 207 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 PBX3P40426 434 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 CEBPZQ03701 1054 aaKnown RBP29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 FAM187BQ17R55 369 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 NOMO2Q5JPE7 1267 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 CNNM3Q8NE01 707 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 PRIMPOLQ96LW4 560 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 ZNF558Q96NG5 402 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 ASB2Q96Q27 587 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 KIFC3Q9BVG8 833 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 IPPQ9Y573 584 aa29.17■■■□□ 2.26
PPP4R1-204ENST00000577393 HIP1RO75146 1068 aa29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 SSBP05455 408 aaKnown RBP eCLIP29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 MARCKSP29966 332 aaPredicted RBP29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 CDR2LQ86X02 465 aaPredicted RBP29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 DAW1Q8N136 415 aa29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 SYT2Q8N9I0 419 aaPredicted RBP29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 CALML4Q96GE6 196 aa29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 RSAD1Q9HA92 442 aa29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 ATG2AQ2TAZ0 1938 aa29.16■■■□□ 2.26
PPP4R1-204ENST00000577393 A0A1B0GUA9 196 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 PLA2G4BP0C869 781 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 UBE3AQ05086 875 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 MAPK6Q16659 721 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 TJAP1Q5JTD0 557 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 USP28Q96RU2 1077 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 CCDC113Q9H0I3 377 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 TBC1D13Q9NVG8 400 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 HES2Q9Y543 173 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 XIRP2A4UGR9 3374 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 CNTNAP2Q9UHC6 1331 aa29.15■■■□□ 2.26
PPP4R1-204ENST00000577393 PLXNA4Q9HCM2 1894 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 BRWD1Q9NSI6 2320 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 TTLL13PA6NNM8 815 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 PRKCBP05771 671 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 ITGA4P13612 1032 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 LIG1P18858 919 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 IRS1P35568 1242 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 SLC12A3P55017 1021 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 MAPK7Q13164 816 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 SLC27A1Q6PCB7 646 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 TRIM6Q9C030 488 aaPredicted RBP29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 RNF39Q9H2S5 420 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 SPG21Q9NZD8 308 aa29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 FBXO2Q9UK22 296 aaPredicted RBP29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 SPTBN5Q9NRC6 3674 aaKnown RBP29.14■■■□□ 2.26
PPP4R1-204ENST00000577393 ACKR2O00590 384 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 NPTXRO95502 500 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 GUCY2CP25092 1073 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 AFF1P51825 1210 aaKnown RBP29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 EFNA5P52803 228 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 PEX3P56589 373 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 BCAR1P56945 870 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 PLCB3Q01970 1234 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 PRPF4BQ13523 1007 aaKnown RBP29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 SPRYD3Q8NCJ5 442 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 URGCPQ8TCY9 931 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 DRC1Q96MC2 740 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 TIPINQ9BVW5 301 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 NRDE2Q9H7Z3 1164 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 UBE2ZQ9H832 354 aaPredicted RBP29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 UBN1Q9NPG3 1134 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 USP20Q9Y2K6 914 aa29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 SRPRBQ9Y5M8 271 aaKnown RBP29.13■■■□□ 2.25
PPP4R1-204ENST00000577393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 CCDC169A6NNP5 214 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 PPM1AP35813 382 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 NPTX2P47972 431 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 ALDH7A1P49419 539 aaKnown RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 RNASELQ05823 741 aaKnown RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 RAD51AP2Q09MP3 1159 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 KARSQ15046 597 aaKnown RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 AAK1Q2M2I8 961 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 SPECC1Q5M775 1068 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 LRRC15Q8TF66 581 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 MRPS27Q92552 414 aaKnown RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 APOL6Q9BWW8 343 aa29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 COL25A1Q9BXS0 654 aaPredicted RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 NXF3Q9H4D5 531 aaKnown RBP29.12■■■□□ 2.25
PPP4R1-204ENST00000577393 SFI1A8K8P3 1242 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 DLL1O00548 723 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 ZC3H11AO75152 810 aaKnown RBP eCLIP29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 EDN1P05305 212 aa29.11■■■□□ 2.25
PPP4R1-204ENST00000577393 PLCG1P19174 1290 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms