RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NIFKQ9BYG3 293 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 IL23AQ9NPF7 189 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 PCDHA2Q9Y5H9 948 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 COL1A2P08123 1366 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 TRANK1O15050 2925 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 XIRP2A4UGR9 3374 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 VWA3AA6NCI4 1184 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 RRN3P2A6NIE6 340 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 A6NJY4 79 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 RSPH10B2B2RC85 870 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 F13A1P00488 732 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 CXCL10P02778 98 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 VTNP04004 478 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 HSP90AA1P07900 732 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 RSPH10BP0C881 870 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 GNAT1P11488 350 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 YWHABP31946 246 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 CTSOP43234 321 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 BFSP2Q13515 415 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 XKR3Q5GH77 459 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 FAM26DQ5JW98 314 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 RASIP1Q5U651 963 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 RPAINQ86UA6 219 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 C4orf19Q8IY42 314 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 TMEM199Q8N511 208 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 TMEM40Q8WWA1 233 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 XPNPEP1Q9NQW7 623 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 LRWD1Q9UFC0 647 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 FBXO2Q9UK22 296 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 COL6A3P12111 3177 aa10.58□□□□□ -0.72
NPLOC4-219ENST00000576713 SMIM35A0A1B0GVV1 85 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 MAFO75444 373 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 LYPLA2O95372 231 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 BRD1O95696 1058 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 MARCKSP29966 332 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 PRPHP41219 470 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 RNF144AP50876 292 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 MRPS6P82932 125 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 LPIN1Q14693 890 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 TLR1Q15399 786 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 EFCAB12Q6NXP0 572 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 DTHD1Q6ZMT9 781 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 OTOP2Q7RTS6 562 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 TMCO2Q7Z6W1 182 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 KSR1Q8IVT5 923 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 FAM167AQ96KS9 214 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 CLIC6Q96NY7 704 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 ZSWIM4Q9H7M6 989 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 AGO3Q9H9G7 860 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 CYP26B1Q9NR63 512 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 SCHIP1Q9P0W5 487 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 CDY2AQ9Y6F7 541 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 TET1Q8NFU7 2136 aa10.57□□□□□ -0.72
NPLOC4-219ENST00000576713 PTPRSQ13332 1948 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 GRXCR1A8MXD5 290 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 LAD1O00515 517 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 GPR32O75388 356 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 GHRP10912 638 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 RPA1P27694 616 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 GPC1P35052 558 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 RARRES1P49788 294 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 PPIGQ13427 754 aaKnown RBP eCLIP10.56□□□□□ -0.722e-11■■□□□ 13
NPLOC4-219ENST00000576713 PDIA5Q14554 519 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 KIZQ2M2Z5 673 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 FBXO47Q5MNV8 452 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 TAF2Q6P1X5 1199 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 SNX29Q8TEQ0 813 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 LINC01599Q8WXQ3 324 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 TMEM143Q96AN5 459 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 CEP170P1Q96L14 293 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 ZFP42Q96MM3 310 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 PLIN2Q99541 437 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 POLR3CQ9BUI4 534 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 GRIP2Q9C0E4 1043 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 ADAMTS10Q9H324 1103 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 DHX33Q9H6R0 707 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 TUFT1Q9NNX1 390 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 POLMQ9NP87 494 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 ATP13A2Q9NQ11 1180 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 NRBP2Q9NSY0 501 aa10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 MYH9P35579 1960 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-219ENST00000576713 E9PMD0 336 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 CSDE1O75534 798 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 CCT6AP40227 531 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 DEFB103AP81534 67 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 FOXK2Q01167 660 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 DNM1Q05193 864 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms