RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 PRPF31Q8WWY3 499 aaKnown RBP23.36■■□□□ 1.33
HERC2-204ENST00000563945 AGPAT5Q9NUQ2 364 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 KCNJ14Q9UNX9 436 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 CNTNAP2Q9UHC6 1331 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 MEIS3P2A8K0S8 358 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 EML1O00423 815 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 ASAP2O43150 1006 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 SLC37A4O43826 429 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 GFRA3O60609 400 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 ASGR2P07307 311 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 PPP2R5CQ13362 524 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 OTOP3Q7RTS5 596 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 ZNF280BQ86YH2 543 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 TCP11Q8WWU5 503 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 TMEM143Q96AN5 459 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 AIFM3Q96NN9 605 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 SFXN1Q9H9B4 322 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 IFT122Q9HBG6 1241 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 UBN1Q9NPG3 1134 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 MRPL17Q9NRX2 175 aaKnown RBP23.35■■□□□ 1.33
HERC2-204ENST00000563945 PDRG1Q9NUG6 133 aa23.35■■□□□ 1.33
HERC2-204ENST00000563945 GALR2O43603 387 aaPredicted RBP23.34■■□□□ 1.33
HERC2-204ENST00000563945 GAS2O43903 313 aaKnown RBP23.34■■□□□ 1.33
HERC2-204ENST00000563945 CCNT1O60563 726 aaKnown RBP23.34■■□□□ 1.33
HERC2-204ENST00000563945 BAG4O95429 457 aaKnown RBP23.34■■□□□ 1.33
HERC2-204ENST00000563945 LAMTOR4Q0VGL1 99 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 PTPN14Q15678 1187 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 PPP4R3AQ6IN85 833 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 ELMSAN1Q6PJG2 1045 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 MRPL10Q7Z7H8 261 aaKnown RBP23.34■■□□□ 1.33
HERC2-204ENST00000563945 CNNM3Q8NE01 707 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 BCL7CQ8WUZ0 217 aaPredicted RBP23.34■■□□□ 1.33
HERC2-204ENST00000563945 TMEM175Q9BSA9 504 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 TM6SF1Q9BZW5 370 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 SSX2IPQ9Y2D8 614 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 CACNA1HO95180 2353 aa23.34■■□□□ 1.33
HERC2-204ENST00000563945 KMT2EQ8IZD2 1858 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 ERLIN2O94905 339 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 ITGA4P13612 1032 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 EPHA7Q15375 998 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 AGMOQ6ZNB7 445 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 CCDC149Q6ZUS6 474 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 GPR149Q86SP6 731 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 KLHL5Q96PQ7 755 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 DHX33Q9H6R0 707 aaKnown RBP23.33■■□□□ 1.33
HERC2-204ENST00000563945 BMP2KQ9NSY1 1161 aaPredicted RBP23.33■■□□□ 1.33
HERC2-204ENST00000563945 DPP7Q9UHL4 492 aa23.33■■□□□ 1.33
HERC2-204ENST00000563945 TBX3O15119 743 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 NR1I2O75469 434 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 DDHD2O94830 711 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 POMCP01189 267 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 YWHABP31946 246 aaKnown RBP23.32■■□□□ 1.32
HERC2-204ENST00000563945 NPY5RQ15761 445 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 XKR9Q5GH70 373 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 NCAPH2Q6IBW4 605 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 C4orf19Q8IY42 314 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 RNF149Q8NC42 400 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 LXNQ9BS40 222 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 KCNMB3Q9NPA1 279 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 VAV3Q9UKW4 847 aa23.32■■□□□ 1.32
HERC2-204ENST00000563945 NRP1O14786 923 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 URODP06132 367 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 OR1G1P47890 313 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 AK2P54819 239 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 ASTLQ6HA08 431 aaPredicted RBP23.31■■□□□ 1.32
HERC2-204ENST00000563945 PIK3AP1Q6ZUJ8 805 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 ZNF579Q8NAF0 562 aaKnown RBP23.31■■□□□ 1.32
HERC2-204ENST00000563945 PHF20Q9BVI0 1012 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 ZSWIM4Q9H7M6 989 aa23.31■■□□□ 1.32
HERC2-204ENST00000563945 ZFHX2Q9C0A1 2572 aaPredicted RBP23.31■■□□□ 1.32
HERC2-204ENST00000563945 C2CD2LO14523 706 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 CNPP09543 421 aaKnown RBP23.3■■□□□ 1.32
HERC2-204ENST00000563945 NCLP19338 710 aaKnown RBP23.3■■□□□ 1.32
HERC2-204ENST00000563945 AXLP30530 894 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 CLCN4P51793 760 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 EMC2Q15006 297 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 FERMT3Q86UX7 667 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 SLFN12Q8IYM2 578 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 FLCNQ8NFG4 579 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 CCDC43Q96MW1 224 aaKnown RBP23.3■■□□□ 1.32
HERC2-204ENST00000563945 MTRQ99707 1265 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 SMOC2Q9H3U7 446 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 MINDY3Q9H8M7 445 aa23.3■■□□□ 1.32
HERC2-204ENST00000563945 PRG3Q9Y2Y8 225 aaPredicted RBP23.3■■□□□ 1.32
HERC2-204ENST00000563945 SOD2P04179 222 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 ADH1AP07327 375 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 TFDP1Q14186 410 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 MXD4Q14582 209 aaPredicted RBP23.29■■□□□ 1.32
HERC2-204ENST00000563945 PCBP1Q15365 356 aaKnown RBP eCLIP23.29■■□□□ 1.32
HERC2-204ENST00000563945 UBXN11Q5T124 520 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 NOTUMQ6P988 496 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 TPH2Q8IWU9 490 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 HACE1Q8IYU2 909 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 DYDC2Q96IM9 177 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 VN1R3Q9BXE9 311 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 RGL1Q9NZL6 768 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 FBXL21Q9UKT6 434 aa23.29■■□□□ 1.32
HERC2-204ENST00000563945 B4GALT3O60512 393 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 HOXA11P31270 313 aaPredicted RBP23.28■■□□□ 1.32
HERC2-204ENST00000563945 CLCN5P51795 746 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms