RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 SRGAP1Q7Z6B7 1085 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
SF3B3-202ENST00000562722 NAP1L4Q99733 375 aaKnown RBP14.51□□□□□ -0.09
SF3B3-202ENST00000562722 PHF20Q9BVI0 1012 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 TM6SF1Q9BZW5 370 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 MFSD1Q9H3U5 465 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 SFXN1Q9H9B4 322 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 KCNMB3Q9NPA1 279 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 STK39Q9UEW8 545 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 LIMD1Q9UGP4 676 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 PPME1Q9Y570 386 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 IRAK3Q9Y616 596 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 CNTNAP2Q9UHC6 1331 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 C2CD2LO14523 706 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
SF3B3-202ENST00000562722 POMCP01189 267 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 ALDH2P05091 517 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 YWHABP31946 246 aaKnown RBP14.5□□□□□ -0.09
SF3B3-202ENST00000562722 CYP4A11Q02928 519 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 SCRN1Q12765 414 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 EMC2Q15006 297 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 PPP4R3AQ6IN85 833 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 AGMOQ6ZNB7 445 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 PLCD3Q8N3E9 789 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 RNF149Q8NC42 400 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 SLC22A17Q8WUG5 538 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 TCP11Q8WWU5 503 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 ACSF2Q96CM8 615 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-202ENST00000562722 CCDC43Q96MW1 224 aaKnown RBP14.5□□□□□ -0.09
SF3B3-202ENST00000562722 SMOC2Q9H3U7 446 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 DHX33Q9H6R0 707 aaKnown RBP14.5□□□□□ -0.09
SF3B3-202ENST00000562722 MINDY3Q9H8M7 445 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 RGL1Q9NZL6 768 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 KANSL3Q9P2N6 904 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-202ENST00000562722 FAN1Q9Y2M0 1017 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 KMT2EQ8IZD2 1858 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 TRIOO75962 3097 aa14.5□□□□□ -0.09
SF3B3-202ENST00000562722 H0Y858 1186 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 GAS2O43903 313 aaKnown RBP14.49□□□□□ -0.09
SF3B3-202ENST00000562722 B4GALT3O60512 393 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 GFRA3O60609 400 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 DTNBO60941 627 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 DDHD2O94830 711 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
SF3B3-202ENST00000562722 URODP06132 367 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 ITGA4P13612 1032 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 NCBP1Q09161 790 aaKnown RBP14.49□□□□□ -0.09
SF3B3-202ENST00000562722 CTTNQ14247 550 aaKnown RBP14.49□□□□□ -0.09
SF3B3-202ENST00000562722 EPHA7Q15375 998 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 CCDC149Q6ZUS6 474 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 TPH2Q8IWU9 490 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 C4orf19Q8IY42 314 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 ZDHHC14Q8IZN3 488 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 DYDC2Q96IM9 177 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 KLHL5Q96PQ7 755 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 MTRQ99707 1265 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 TMEM175Q9BSA9 504 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 VN1R3Q9BXE9 311 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 MRPL17Q9NRX2 175 aaKnown RBP14.49□□□□□ -0.09
SF3B3-202ENST00000562722 GJB4Q9NTQ9 266 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
SF3B3-202ENST00000562722 PRG3Q9Y2Y8 225 aaPredicted RBP14.49□□□□□ -0.09
SF3B3-202ENST00000562722 STK36Q9NRP7 1315 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 NRP1O14786 923 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 TBX3O15119 743 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 ASAP2O43150 1006 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 HOXA11P31270 313 aaPredicted RBP14.48□□□□□ -0.09
SF3B3-202ENST00000562722 OR1G1P47890 313 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 AFF1P51825 1210 aaKnown RBP14.48□□□□□ -0.09
SF3B3-202ENST00000562722 AK2P54819 239 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 UBXN11Q5T124 520 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 MRPL10Q7Z7H8 261 aaKnown RBP14.48□□□□□ -0.09
SF3B3-202ENST00000562722 FERMT3Q86UX7 667 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 SLFN12Q8IYM2 578 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 CNNM3Q8NE01 707 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 HAS1Q92839 578 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 APOL6Q9BWW8 343 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 ZSWIM4Q9H7M6 989 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 BRMS1Q9HCU9 246 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 UBN1Q9NPG3 1134 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 ZDBF2Q9HCK1 2354 aa14.48□□□□□ -0.09
SF3B3-202ENST00000562722 INO80B-WBP1J3KQ70 363 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
SF3B3-202ENST00000562722 ST18O60284 1047 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 CNPP09543 421 aaKnown RBP14.47□□□□□ -0.09
SF3B3-202ENST00000562722 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
SF3B3-202ENST00000562722 MLH1P40692 756 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 CLCN4P51793 760 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 NUBP1P53384 320 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 TFDP1Q14186 410 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 ELMSAN1Q6PJG2 1045 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 OTOP3Q7RTS5 596 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 GPR149Q86SP6 731 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 FLCNQ8NFG4 579 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms