RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 HLA-DOAP06340 250 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 ARHGAP44Q17R89 818 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 CCDC62Q6P9F0 684 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 NME9Q86XW9 330 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 BOLLQ8N9W6 283 aaKnown RBP4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 CAGE1Q8TC20 777 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 SH3TC2Q8TF17 1288 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 SMG7Q92540 1137 aaKnown RBP4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 NDC1Q9BTX1 674 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 NDOR1Q9UHB4 597 aa4.63□□□□□ -1.67
HDGFL3-202ENST00000562702 ARHGEF17Q96PE2 2063 aaPredicted RBP4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 HOXA3O43365 443 aaPredicted RBP4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 LPXNO60711 386 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 MXRA7P84157 204 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 VPS72Q15906 364 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 PRAMEF9Q5VWM5 478 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 OVCH1Q7RTY7 1134 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 GDF7Q7Z4P5 450 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 TUBGCP5Q96RT8 1024 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 MRPL4Q9BYD3 311 aaKnown RBP4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 ZNF768Q9H5H4 540 aaKnown RBP4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 PIF1Q9H611 641 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 AKIP1Q9NQ31 210 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 ACSS2Q9NR19 701 aa4.62□□□□□ -1.67
HDGFL3-202ENST00000562702 COL11A2P13942 1736 aaPredicted RBP4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 AHRRA9YTQ3 701 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 DIRC3C9JPN6 131 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 DNAJC6O75061 913 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 STC2O76061 302 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 BMPR1AP36894 532 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 SEC24CP53992 1094 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 TRIM61Q5EBN2 209 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 SP5Q6BEB4 398 aaPredicted RBP4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 FSTL4Q6MZW2 842 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 PLXDC1Q8IUK5 500 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 OR5M3Q8NGP4 307 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 OSBPL6Q9BZF3 934 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 PCIF1Q9H4Z3 704 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 SLC52A2Q9HAB3 445 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 NCOA5Q9HCD5 579 aaKnown RBP4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 SYBUQ9NX95 663 aa4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 TESQ9UGI8 421 aaKnown RBP4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.61□□□□□ -1.67
HDGFL3-202ENST00000562702 MYADML2A6NDP7 307 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 KRT37O76014 449 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 NDUFA10O95299 355 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 SPATA31D3P0C874 917 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 HNRNPLP14866 589 aaKnown RBP eCLIP4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 ZFP36P26651 326 aaKnown RBP4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 APOBEC3AP31941 199 aaPredicted RBP4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 KIF11P52732 1056 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 WNT3AP56704 352 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 TMEM177Q53S58 311 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 ABHD17BQ5VST6 288 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 SPATA31D4Q6ZUB0 917 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 SIMC1Q8NDZ2 872 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 GSTCDQ8NEC7 633 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 OR52N2Q8NGI0 321 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 LINC00476Q8WZB0 136 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 TMEM260Q9NX78 707 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 TLK1Q9UKI8 766 aa4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 EPN1Q9Y6I3 576 aaPredicted RBP4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 SETD1BQ9UPS6 1966 aaKnown RBP4.6□□□□□ -1.67
HDGFL3-202ENST00000562702 PRR5-ARHGAP8B1AHC4 643 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 IKBKBO14920 756 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 PLD2O14939 933 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 KCNQ2O43526 872 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 NCR1O76036 304 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 CYP17A1P05093 508 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 HSP90B1P14625 803 aaKnown RBP4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 TYRP1P17643 537 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 SQSTM1Q13501 440 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 FAM214AQ32MH5 1076 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 TIGD7Q6NT04 549 aaPredicted RBP4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 NOP9Q86U38 636 aaKnown RBP4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 HOMER1Q86YM7 354 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 SYNPOQ8N3V7 929 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 DUSP26Q9BV47 211 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 HAPLN2Q9GZV7 340 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 FRMD4BQ9Y2L6 1034 aa4.59□□□□□ -1.67
HDGFL3-202ENST00000562702 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 PIPSLA2A3N6 862 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 ADCY1Q08828 1119 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 ZNF174Q15697 407 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 FNDC3BQ53EP0 1204 aaKnown RBP4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 DOK3Q7L591 496 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 OTOP1Q7RTM1 612 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 BRAPQ7Z569 592 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 IGSF22Q8N9C0 903 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 IL17RAQ96F46 866 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 HIST1H2AHQ96KK5 128 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 RNPC3Q96LT9 517 aaKnown RBP4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 HIST1H2AJQ99878 128 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 LRFN3Q9BTN0 628 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 PRDM13Q9H4Q3 707 aa4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 TNPO3Q9Y5L0 923 aaKnown RBP4.58□□□□□ -1.68
HDGFL3-202ENST00000562702 ESRRBO95718 433 aa4.57□□□□□ -1.68
HDGFL3-202ENST00000562702 ZBTB48P10074 688 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms