RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 ADAM15Q13444 863 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 ECM1Q16610 540 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 NOTUMQ6P988 496 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 TMC7Q7Z402 723 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 SLC39A11Q8N1S5 342 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 EFHBQ8N7U6 833 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 MCPH1Q8NEM0 835 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 RSAD1Q9HA92 442 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 CD207Q9UJ71 328 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 BARX2Q9UMQ3 279 aaPredicted RBP13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 FAM50BQ9Y247 325 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 LZTS1Q9Y250 596 aa13.67□□□□□ -0.22
SEMA4B-220ENST00000561321 PP2D1A8MPX8 630 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 HIDE1A8MVS5 230 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 B4GALT5O43286 388 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 GLP2RO95838 553 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 POMCP01189 267 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 ITGA4P13612 1032 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 AXLP30530 894 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 AFF1P51825 1210 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 PDE12Q6L8Q7 609 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 FAM178BQ8IXR5 827 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 FAM193BQ96PV7 902 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 APOL6Q9BWW8 343 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 BHMT2Q9H2M3 363 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 NRDE2Q9H7Z3 1164 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 POLD4Q9HCU8 107 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 CD320Q9NPF0 282 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 CLEC1BQ9P126 229 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 HES2Q9Y543 173 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 IPPQ9Y573 584 aa13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-220ENST00000561321 MBTPS2O43462 519 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 B4GALT3O60512 393 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 GALTP07902 379 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 ARF4P18085 180 aaPredicted RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 LIG1P18858 919 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 NCLP19338 710 aaKnown RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 CDC25AP30304 524 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 PDIA5Q14554 519 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 IL17AQ16552 155 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 AMHR2Q16671 573 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 DUSP6Q16828 381 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 TMEM132AQ24JP5 1023 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 KRT79Q5XKE5 535 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 DTHD1Q6ZMT9 781 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 SMG8Q8ND04 991 aaKnown RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 NFKBIZQ9BYH8 718 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 NGRNQ9NPE2 291 aaKnown RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.65□□□□□ -0.22
SEMA4B-220ENST00000561321 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 LAD1O00515 517 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 NPTXRO95502 500 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 CYP11B2P19099 503 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 MUTP22033 750 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 SLC11A1P49279 550 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 SMC1AQ14683 1233 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 RILPL1Q5EBL4 403 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 GJD3Q8N144 294 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 IGSF22Q8N9C0 903 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 BCL7CQ8WUZ0 217 aaPredicted RBP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 BSNDQ8WZ55 320 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 KHSRPQ92945 711 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 CDCA3Q99618 268 aaPredicted RBP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 NXF3Q9H4D5 531 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 EPHX3Q9H6B9 360 aa13.64□□□□□ -0.23
SEMA4B-220ENST00000561321 E9PMD0 336 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms