RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZBTB42B2RXF5 422 aa15.02■□□□□ -0
TPM1-215ENST00000558868 ANKRD63C9JTQ0 380 aa15.02■□□□□ -0
TPM1-215ENST00000558868 PMM2O15305 246 aa15.02■□□□□ -0
TPM1-215ENST00000558868 IPO7O95373 1038 aaKnown RBP15.02■□□□□ -0
TPM1-215ENST00000558868 LDHAP00338 332 aaKnown RBP15.02■□□□□ -0
TPM1-215ENST00000558868 MMP3P08254 477 aa15.02■□□□□ -0
TPM1-215ENST00000558868 TNNT1P13805 278 aa15.02■□□□□ -0
TPM1-215ENST00000558868 TMOD1P28289 359 aa15.02■□□□□ -0
TPM1-215ENST00000558868 FMO5P49326 533 aa15.02■□□□□ -0
TPM1-215ENST00000558868 CAPSQ13938 189 aa15.02■□□□□ -0
TPM1-215ENST00000558868 TMEM63BQ5T3F8 832 aa15.02■□□□□ -0
TPM1-215ENST00000558868 PDXDC1Q6P996 788 aa15.02■□□□□ -0
TPM1-215ENST00000558868 RRAGAQ7L523 313 aa15.02■□□□□ -0
TPM1-215ENST00000558868 GPD1LQ8N335 351 aa15.02■□□□□ -0
TPM1-215ENST00000558868 CCDC155Q8N6L0 562 aa15.02■□□□□ -0
TPM1-215ENST00000558868 TMC2Q8TDI7 906 aa15.02■□□□□ -0
TPM1-215ENST00000558868 SUGCTQ9HAC7 445 aa15.02■□□□□ -0
TPM1-215ENST00000558868 SUCLA2Q9P2R7 463 aaPredicted RBP15.02■□□□□ -0
TPM1-215ENST00000558868 GJD2Q9UKL4 321 aa15.02■□□□□ -0
TPM1-215ENST00000558868 STYXL1Q9Y6J8 313 aa15.02■□□□□ -0
TPM1-215ENST00000558868 USP27XA6NNY8 438 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 H3BRB1 525 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 HSPA8P11142 646 aaKnown RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 INSRRP14616 1297 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 CYP2B6P20813 491 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 RFX1P22670 979 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 PON1P27169 355 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 GTF2H1P32780 548 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 KRT83P78385 493 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 MYL7Q01449 175 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 POU5F1BQ06416 359 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 LAMTOR4Q0VGL1 99 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 SNRNP35Q16560 246 aaKnown RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 GJC2Q5T442 439 aaPredicted RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 SFMBT2Q5VUG0 894 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 EFCAB12Q6NXP0 572 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 RAD9BQ6WBX8 426 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 ZPBP2Q6X784 338 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 TOGARAM2Q6ZUX3 1019 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 NYAP1Q6ZVC0 841 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 TAS1R3Q7RTX0 852 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 RDH13Q8NBN7 331 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 BAP1Q92560 729 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 VTI1AQ96AJ9 217 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 C16orf45Q96MC5 204 aaPredicted RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 FBXL18Q96ME1 805 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 C16orf70Q9BSU1 422 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 CRACR2AQ9BSW2 395 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 AP5M1Q9H0R1 490 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 GANQ9H2C0 597 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 TUT1Q9H6E5 874 aaKnown RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 GCNT4Q9P109 453 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 ADGRG1Q9Y653 693 aa15.01□□□□□ -0.01
TPM1-215ENST00000558868 EPN1Q9Y6I3 576 aaPredicted RBP15.01□□□□□ -0.01
TPM1-215ENST00000558868 RRN3P2A6NIE6 340 aa15□□□□□ -0.01
TPM1-215ENST00000558868 A6NJR5 290 aa15□□□□□ -0.01
TPM1-215ENST00000558868 ZNF233A6NK53 670 aa15□□□□□ -0.01
TPM1-215ENST00000558868 LRRC53A6NM62 1247 aa15□□□□□ -0.01
TPM1-215ENST00000558868 TISP43B9A030 160 aa15□□□□□ -0.01
TPM1-215ENST00000558868 EXTL3O43909 919 aa15□□□□□ -0.01
TPM1-215ENST00000558868 NOL4O94818 638 aa15□□□□□ -0.01
TPM1-215ENST00000558868 NDUFA10O95299 355 aa15□□□□□ -0.01
TPM1-215ENST00000558868 C22orf31O95567 290 aa15□□□□□ -0.01
TPM1-215ENST00000558868 ZNF865P0CJ78 1059 aaPredicted RBP15□□□□□ -0.01
TPM1-215ENST00000558868 ADSSP30520 456 aa15□□□□□ -0.01
TPM1-215ENST00000558868 CPT1AP50416 773 aa15□□□□□ -0.01
TPM1-215ENST00000558868 POLR2FP61218 127 aaKnown RBP15□□□□□ -0.01
TPM1-215ENST00000558868 GRM1Q13255 1194 aa15□□□□□ -0.01
TPM1-215ENST00000558868 DEFB115Q30KQ5 88 aa15□□□□□ -0.01
TPM1-215ENST00000558868 KLHDC7AQ5VTJ3 777 aa15□□□□□ -0.01
TPM1-215ENST00000558868 CYP4F22Q6NT55 531 aa15□□□□□ -0.01
TPM1-215ENST00000558868 WDR59Q6PJI9 974 aa15□□□□□ -0.01
TPM1-215ENST00000558868 REXO1L1PQ8IX06 675 aa15□□□□□ -0.01
TPM1-215ENST00000558868 TXLNBQ8N3L3 684 aa15□□□□□ -0.01
TPM1-215ENST00000558868 MFSD14AQ96MC6 490 aa15□□□□□ -0.01
TPM1-215ENST00000558868 MRPL4Q9BYD3 311 aaKnown RBP15□□□□□ -0.01
TPM1-215ENST00000558868 RNPEPQ9H4A4 650 aa15□□□□□ -0.01
TPM1-215ENST00000558868 GNEQ9Y223 722 aaKnown RBP15□□□□□ -0.01
TPM1-215ENST00000558868 SIP14410 1827 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 EIF3CLB5ME19 914 aaKnown RBP14.99□□□□□ -0.01
TPM1-215ENST00000558868 EPHB6O15197 1021 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 DYNC1LI2O43237 492 aaPredicted RBP14.99□□□□□ -0.01
TPM1-215ENST00000558868 SLC9A1P19634 815 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 KLRC1P26715 233 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 KIF22Q14807 665 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 MAPK6Q16659 721 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 SLC9C1Q4G0N8 1177 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 MFSD14CQ5VZR4 134 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 SLC39A4Q6P5W5 647 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 METTL13Q8N6R0 699 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 RNF149Q8NC42 400 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 CCDC42Q96M95 316 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 SPAG5Q96R06 1193 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 EIF3CQ99613 913 aaKnown RBP14.99□□□□□ -0.01
TPM1-215ENST00000558868 CHP1Q99653 195 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 NFKBIZQ9BYH8 718 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 NHEJ1Q9H9Q4 299 aaPredicted RBP14.99□□□□□ -0.01
TPM1-215ENST00000558868 FLRT1Q9NZU1 646 aa14.99□□□□□ -0.01
TPM1-215ENST00000558868 AGO2Q9UKV8 859 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms