RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 KLHL7Q8IXQ5 586 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 PPM1KQ8N3J5 372 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 TPCN2Q8NHX9 752 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 POMGNT1Q8WZA1 660 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 UBXN6Q9BZV1 441 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 OAZ1P54368 228 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 C8orf74Q6P047 294 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 MMGT1Q8N4V1 131 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 KRT12Q99456 494 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 THAP2Q9H0W7 228 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 POLR3FQ9H1D9 316 aaPredicted RBP11.45□□□□□ -0.58
TPM1-210ENST00000558264 CYP26B1Q9NR63 512 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 NENFQ9UMX5 172 aa11.45□□□□□ -0.58
TPM1-210ENST00000558264 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
TPM1-210ENST00000558264 IRF6O14896 467 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 CEP104O60308 925 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 MAPTP10636 758 aaKnown RBP11.44□□□□□ -0.58
TPM1-210ENST00000558264 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 ALCAMQ13740 583 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 TRADDQ15628 312 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 CCNI2Q6ZMN8 369 aaPredicted RBP11.44□□□□□ -0.58
TPM1-210ENST00000558264 LRRC57Q8N9N7 239 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 SLC30A5Q8TAD4 765 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 TAF4BQ92750 862 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 FAM213AQ9BRX8 229 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 SELENOOQ9BVL4 669 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 RNF181Q9P0P0 153 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 VPS18Q9P253 973 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 SPATA31C2B4DYI2 1134 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
TPM1-210ENST00000558264 KIF4AO95239 1232 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 SGPL1O95470 568 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 ATP4AP20648 1035 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 GNPTABQ3T906 1256 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 CCDC70Q6NSX1 233 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 ABHD15Q6UXT9 468 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 PEX26Q7Z412 305 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 MAP4K3Q8IVH8 894 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 SAMD3Q8N6K7 520 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 SLC35G2Q8TBE7 412 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 DHX38Q92620 1227 aaKnown RBP11.44□□□□□ -0.58
TPM1-210ENST00000558264 LOXHD1Q8IVV2 1947 aa11.44□□□□□ -0.58
TPM1-210ENST00000558264 TARSL2A2RTX5 802 aaKnown RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 PGK2P07205 417 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 GLI1P08151 1106 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 TTLL12Q14166 644 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 STXBP2Q15833 593 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 SND1Q7KZF4 910 aaKnown RBP eCLIP11.43□□□□□ -0.58
TPM1-210ENST00000558264 TAS1R3Q7RTX0 852 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 TAS1R2Q8TE23 839 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 PNMA2Q9UL42 364 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 FAN1Q9Y2M0 1017 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 CSADQ9Y600 493 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 TMEM110-MUSTN1A8MSY1 372 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 CYP26A1O43174 497 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 CLSTN1O94985 981 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 WNT7BP56706 349 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 CETN1Q12798 172 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 SEZ6Q53EL9 994 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 NOL9Q5SY16 702 aaKnown RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 C10orf76Q5T2E6 689 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 MIS18BP1Q6P0N0 1132 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 XRRA1Q6P2D8 792 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ADAT2Q7Z6V5 191 aaKnown RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 SLC47A2Q86VL8 602 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 RPUSD2Q8IZ73 545 aaKnown RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 METTL13Q8N6R0 699 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 IFT81Q8WYA0 676 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 CTNNBL1Q8WYA6 563 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 DCPSQ96C86 337 aaKnown RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 KREMEN1Q96MU8 473 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 SYT11Q9BT88 431 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 ATP6V0A4Q9HBG4 840 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 LRRIQ4A6NIV6 560 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ATP2A1O14983 1001 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 HARSP12081 509 aaKnown RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 MARK3P27448 753 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ALDH5A1P51649 535 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 GUCY2DQ02846 1103 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 EMC2Q15006 297 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 WDR78Q5VTH9 848 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ZNF572Q7Z3I7 529 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 C12orf56Q8IXR9 622 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 PARD3BQ8TEW8 1205 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms